Rattus norvegicus (rat): 287099
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Entry
287099 CDS
T01003
Symbol
Cldn9
Name
(RefSeq) claudin-9
KO
K06087
claudin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03272
Virion - Hepatitis viruses
rno04382
Cornified envelope formation
rno04514
Cell adhesion molecules
rno04530
Tight junction
rno04670
Leukocyte transendothelial migration
rno05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
287099 (Cldn9)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
287099 (Cldn9)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
287099 (Cldn9)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
287099 (Cldn9)
09158 Development and regeneration
04382 Cornified envelope formation
287099 (Cldn9)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
287099 (Cldn9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
287099 (Cldn9)
04147 Exosome [BR:
rno04147
]
287099 (Cldn9)
04515 Cell adhesion molecules [BR:
rno04515
]
287099 (Cldn9)
Cilium and associated proteins [BR:
rno03037
]
Other cilia and associated proteins
Stereociliary proteins
287099 (Cldn9)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
287099 (Cldn9)
Exosomal proteins of colorectal cancer cells
287099 (Cldn9)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
L1 family
287099 (Cldn9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM_230_134
DUF7139
Motif
Other DBs
NCBI-GeneID:
287099
NCBI-ProteinID:
NP_001011889
RGD:
1308999
UniProt:
Q5PPJ3
LinkDB
All DBs
Position
10:complement(13218728..13220159)
Genome browser
AA seq
217 aa
AA seq
DB search
MASTGLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTG
QMQCKVYDSLLALPQDLQAARALCVVALLLALLGLLVAITGAQCTTCVEDEGAKARIVLT
AGVLLLLSGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAAAALLMLGGGL
LCCTCPPSHFERPRGPRLGYSIPSRSGASGLDKRDYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactggccttgaactcctcggcatgaccctggctgtgctaggctggctagga
accctggtgtcctgtgccctgccactgtggaaggtgaccgccttcattggcaacagcatc
gttgtggcccaagtggtatgggaggggctgtggatgtcctgtgtggtccagagcactggg
cagatgcagtgcaaggtgtacgactcgctgctggcgctgccccaggacctgcaggctgcc
agagccctctgtgtcgtggccctcctgctggctttgctgggcctgctggtggctatcacg
ggcgcccagtgcaccacatgtgtggaggacgaaggtgccaaggcacgtattgtgctcacc
gcaggggtcctcctcctcctctcgggcatcctggtgctcatccccgtctgctggacagcc
catgccatcatccaggacttttataacccactggttgctgaagctctcaagagagagctg
ggggcttccctctacctgggctgggccgccgctgcactgctcatgctcggaggagggctc
ctctgctgtacgtgtcccccgtcccacttcgagaggccccgcggccccaggctgggctac
tccatcccttcccgttcaggtgcttcgggacttgataagagggactatgtgtga
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