Rattus norvegicus (rat): 287113
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Entry
287113 CDS
T01003
Symbol
Rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
287113 (Rnps1)
03015 mRNA surveillance pathway
287113 (Rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
287113 (Rnps1)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
287113 (Rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
287113
NCBI-ProteinID:
NP_001011890
RGD:
1307522
Ensembl:
ENSRNOG00000008703
UniProt:
Q6AYK1
A6HCR9
LinkDB
All DBs
Position
10:13950151..13960396
Genome browser
AA seq
305 aa
AA seq
DB search
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGTTKESSEKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS
SNSSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagagaataataaaaag
tccagcactagggctccttctcctaccaaacgaaaggaccgctctgatgagaagtccaag
gatcgatctaaagataaagggaccactaaagagtccagtgagaaggatcgtggcagagat
aagacccggaagagacgcagtgcttcaagcggaagcagcagcaccaggtccaggtccagc
tcaacctccagctcgggctccagcaccagcacgggctcgagcagtggctctagctcgtct
tctgcgtccagccgctcaggaagctccagcacatcccggagctccagttccagcagctcc
tccggctccccaagcccttctcggcgcagacatgacaacaggcggcgttcccgctccaaa
tccaaaccacctaaaagagatgaaaaagagaggaaaaggcggagcccttcacctaaaccc
accaaagtgcacattgggaggctcaccaggaatgtgaccaaggatcatatcatggaaata
ttttctacttacgggaaaattaaaatgattgacatgcctgtggaaaggatgcatcctcat
ctatccaaaggctatgcgtacgtggaattcgagaatccggatgaagcagagaaggcactg
aaacacatggatggaggacaaatagatggccaagagatcactgctactgcggtgttggca
ccctggcctcgtccaccgcctcggcgattcagcccacccaggagaatgcttccaccgcct
cccatgtggcgtaggtcacccccacggatgaggagaaggtctcgatccccaagacgcagg
tcccctgtgcgaaggaggtctcgatcgcctggccgccgccgccacaggagccgatccagc
tccaactcctcccgataa
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