Rattus norvegicus (rat): 287362
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Entry
287362 CDS
T01003
Symbol
Nlrp3
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04217
Necroptosis
rno04621
NOD-like receptor signaling pathway
rno04623
Cytosolic DNA-sensing pathway
rno04625
C-type lectin receptor signaling pathway
rno05132
Salmonella infection
rno05133
Pertussis
rno05135
Yersinia infection
rno05164
Influenza A
rno05171
Coronavirus disease - COVID-19
rno05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
287362 (Nlrp3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
287362 (Nlrp3)
04623 Cytosolic DNA-sensing pathway
287362 (Nlrp3)
04625 C-type lectin receptor signaling pathway
287362 (Nlrp3)
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
287362 (Nlrp3)
05164 Influenza A
287362 (Nlrp3)
09171 Infectious disease: bacterial
05132 Salmonella infection
287362 (Nlrp3)
05135 Yersinia infection
287362 (Nlrp3)
05133 Pertussis
287362 (Nlrp3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
287362 (Nlrp3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
287362 (Nlrp3)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
287362 (Nlrp3)
Membrane trafficking [BR:
rno04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
287362 (Nlrp3)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
287362 (Nlrp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
LRR_6
NOD2_WH
FISNA
LRR_4
nSTAND3
NB-ARC
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
287362
NCBI-ProteinID:
NP_001178571
RGD:
1308314
Ensembl:
ENSRNOG00000003170
UniProt:
D4A523
LinkDB
All DBs
Position
10:44826299..44853373
Genome browser
AA seq
1035 aa
AA seq
DB search
MKMMSVRCKLAQYLEDLEDVDLKKFKMHLEDYPPEKGCVPIPRGQMEKADHLDLATLMID
FNGEEKAWGMAVWIFAAINRRDLWEKAKKDQPEWNDACTSNLSMVCQEDSLEEEWIGLLG
YLSRISICKKKKDYCKIYRRHVRSRFYSIKDRNARLGESVDLNRRYTQLQLVKEHPSKQE
REHELLTIGRTKMWDRPMSSLKLELLFEPEDEHLEPVHTVVFQGAAGIGKTILARKIMLD
WALGKLFKDKFDYLFFIHCREVSLRAPKSLADLIISCWPDPNPPVCKILCKPSRILFLMD
GFDELQGAFDEHIEEVCTDWQKAVRGDILLSSLIRKKLLPKASLLITTRPVALEKLQHLL
DHPRHVEILGFSEAKRKEYFFKYFSNELQAREAFRLIQENEILFTMCFIPLVCWIVCTGL
KQQMETGKSLAQTSKTTTAVYVFFLSSLLQSRGGIEEHLFSAYLPGLCSLAADGIWNQKI
LFEECDLRKHGLQKTDVSAFLRMNVFQKEVDCERFYSFSHMTFQEFFAAMYYLLEEEEEG
VTVRKGPEGCSDLLNRDVKVLLENYGKFEKGYLIFVVRFLFGLVNQERTSYLEKKLSCKI
SQQVRLELLKWIEVKAKAKKLQRQPSQLELFYCLYEMQEEDFVQSAMGHFPKIEINLSTR
MDHVVSSFCIKNCHRVKTLSLGFLHNSPKEEEEEKRGSQPLDQVQCVFPDPHVACSSRLV
NCCLTSSFCRGLFSSLSTNQSLTELDLSDNTLGDPGMRVLCEALQHPGCNIQRLWLGRCG
LTHQCCFNISSVLSSSQKLVELDLSDNALGDFGVRLLCVGLKHLLCNLQKLWLVSCCLTS
ACCQDLALVLSSNHSLTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSLCC
SALTSVLKTNQNLTHLYLRSNALGDMGLKLLCEGLLHPDCKLQMLELDNCSLTSHSCWDL
STILTHNQSLRKLNLSNNDLGDLCVVTLCEVLKQQGCLLQSLQLGEMYLNCETKRTLEAL
QEEKPELTVVFEISW
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgagtgttcgctgcaagctggcccagtatctagaggacctggaagatgtg
gacctcaagaaatttaaaatgcatttggaagattacccacccgagaaaggctgtgttccg
atccccaggggccagatggagaaggcagatcacttggatctagccacactcatgattgac
ttcaatggggaggagaaggcgtggggcatggctgtgtggatctttgcagcgatcaacagg
cgagacctctgggaaaaagctaagaaggaccagccagagtggaatgatgcatgcacgtct
aatctctccatggtgtgccaggaagacagccttgaagaggagtggataggtttgctggga
tatctctcccgcatctcgatttgtaaaaaaaagaaagattactgtaagatatacagaagg
catgtgagaagcaggttctactccatcaaagacaggaatgcacgtctaggtgagagcgtg
gacctcaacagacgctacacccagctccaactggtcaaggagcatccaagcaagcaggaa
agggagcatgaactcttgaccattggcaggactaagatgtgggacaggcccatgagctcc
cttaagctggagctgctctttgagcctgaggatgaacacttggagcccgtgcacacagtg
gtgttccagggagcagcaggcatcggaaaaacaatcctagccaggaagattatgttggac
tgggccttggggaagctcttcaaagacaaatttgattatttgttctttatccactgtcga
gaggtgagcctcagggcaccaaagagcctagcagatctcattatcagctgctggcctgac
ccaaacccaccagtctgcaagatcctgtgcaagccttccaggatcctcttcctcatggac
ggctttgatgagctgcagggggcctttgatgagcacatcgaggaggtctgcacagactgg
cagaaggctgtgaggggagacattctgctaagcagcctcatccgaaagaagttgctgcct
aaggcctctctgcttattacgacgaggccagtagccttggagaagctgcagcatctcctg
gaccacccccgccacgtggagatcctaggtttctctgaggccaaacggaaggagtatttc
tttaagtatttctcaaacgagctgcaggccagggaggccttcaggctgatccaagagaat
gagatcctgtttactatgtgcttcatccccctggtctgctggattgtgtgcacagggcta
aagcagcagatggagactggaaagagcttggcccagacctccaagaccacgactgccgtc
tatgtctttttcctttccagcctgctgcagtcccgggggggcattgaggagcacctcttc
tctgcctacctgccagggctctgttcattggctgcggatggaatttggaaccagaagatc
ctatttgaagagtgtgatctgcggaaacacggcctgcagaagaccgacgtctctgctttc
ctgagaatgaacgtgttccagaaggaggtggactgcgagagattttacagcttcagccac
atgactttccaggagttctttgcggctatgtactatctgctagaagaggaggaagagggg
gtgaccgtgaggaagggaccagaaggctgttcagaccttctgaaccgagacgtgaaggtc
ctattagaaaattacggcaagttcgaaaaaggctatctgatttttgttgtacgcttcctc
tttggccttgtaaaccaggagagaacttcttatttggagaagaagctaagttgcaagatc
tctcagcaagtcagactggagctgctgaagtggatcgaagtgaaagccaaggccaagaag
ctgcagaggcagcccagccagctggaactgttctactgcttgtacgagatgcaggaggaa
gactttgtgcagagcgccatgggccacttccccaaaattgagatcaacctctctaccaga
atggaccacgtggtttcttccttttgcattaagaattgccatagggtaaaaacactttcc
ctgggatttctccacaactcacccaaggaggaagaagaagagaaaagaggaagtcaaccc
ttggaccaggtccagtgtgttttcccagaccctcatgttgcctgttcttccagactggtg
aactgctgcctcacctctagcttctgccgaggtctcttctcaagtctcagcaccaaccag
agcctcactgaactggacctcagtgacaatactctaggggatccaggcatgagggtgctg
tgtgaggcactccagcacccaggctgtaacattcagagactgtggttggggcgctgcgga
ctgacccatcaatgctgtttcaacatctcctctgtcctgagcagcagccagaagctggtg
gagctggacctcagtgacaatgccctgggggactttggagtcagactgctgtgcgtggga
ctgaagcatctgctctgcaacctgcagaaactctggttggtcagctgctgtctcacatct
gcgtgttgtcaggatctcgcattggttctgagctccaaccattctctgaccagactgtac
attggagaaaatgccttgggagactcaggagttcaagttttgtgtgaaaaaatgaaggac
ccacagtgtaacttgcagaagctggggttggtgaattccggccttacttcactgtgctgc
tcagctctgacctctgtgctcaaaaccaaccagaacctcacacacctgtacctacgaagc
aatgcccttggagacatgggactcaagctcctctgtgagggacttctgcaccccgactgt
aagctacagatgctggagttagacaactgcagcctcacctcacactcctgctgggatctc
tccacaattctgacccataaccagagcctccggaagctgaacttgagcaacaacgacctg
ggcgatctgtgtgtggtgacgctctgtgaggttctgaaacagcagggctgcctcctgcag
agcctacagttgggtgaaatgtatttaaattgtgaaacaaaacgtaccttagaagctctc
caggaggaaaagcctgagctgactgttgtttttgagatttcttggtag
DBGET
integrated database retrieval system
