Rattus norvegicus (rat): 287433
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Entry
287433 CDS
T01003
Symbol
Fxr2
Name
(RefSeq) RNA-binding protein FXR2
KO
K15516
fragile X mental retardation protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
287433 (Fxr2)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
287433 (Fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
287433 (Fxr2)
mRNA cycle factors
Stress granule specific factors
287433 (Fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
Tudor_FRX1
KH_9
KH_1
Agenet
KH-I_KHDC4-BBP
NdhS
Motif
Other DBs
NCBI-GeneID:
287433
NCBI-ProteinID:
NP_001094117
RGD:
1307011
Ensembl:
ENSRNOG00000011876
UniProt:
B1H2A6
LinkDB
All DBs
Position
10:54849345..54869713
Genome browser
AA seq
675 aa
AA seq
DB search
MGGLASGGDVEPGLPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLP
PPADYNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTLE
RLRPVNPNPLATKGSFFKVTMAVPEDLREACSNENVHKEFKKALGANCIFLNITDSELFI
LSTTEAPVKRASLLGDMHFRSLRTKLLLMSRNEEATKHLETSKQLAAAFQEEFTVREDLM
GLAIGTHGANIQQARKVPGVTAIELGEETCTFRIYGETPEACRQARSYLEFSEDSVQVPR
NLVGKVIGKNGKVIQEIVDKSGVVRVRVEGDNDKKNPREEGMVPFIFVGTRENISNAQAL
LEYHLSYLQEVEQLRLERLQIDEQLRQIGLGFRPPGSGRGGSGGGSDKAGYTTDESSSSS
LHTTRTYGGSYGGRGRGRRTGGPAYGPSSDPSTASETESEKREESNRAGPGDRDPPSRGE
ESRRRPIGGRGRGPPPVPRPTSRYNSSSISSVLKDPDSNPYSLLDTSEPEPPVDSEPGEP
PPASARRRRSRRRRTDEDRTVMDGGLESDGPNVTENGLEDESRPQRRNRSRRRRNRGNRT
DGSISGDRQPVTVADYISRAESQSRQRPPLERTKPSEDSLSGQKGDSVSRLPKGPSENGE
LSAPLELGSLVNGVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcctggcctctgggggggatgtggagccgggactgcccgtcgaggtgcggggc
tccaacggggccttctacaagggctttgttaaggatgtccatgaagactctgtcactatc
ttctttgaaaacaactggcagagtgagagacagattccctttggggatgtccgactacca
cctccagctgactacaataaggagatcacagaaggagatgaagtagaggtctattcgaga
gccaatgaacaggaaccttgtggttggtggctggcccgggtgcggatgatgaagggagat
ttctatgtcattgagtatgctgcctgtgatgctacctacaatgagattgtcactctggag
cgacttcggccagtcaatcccaatccccttgcaaccaaaggcagcttcttcaaggttacc
atggctgtgcctgaggatcttagagaggcctgctccaatgaaaatgtccataaagagttc
aagaaagcactgggagccaactgcatcttcctcaacatcacagacagtgagctcttcatt
ctgtcaaccacagaagcccctgtgaagagggcatctttgctgggtgacatgcatttccga
agccttcgtaccaaattgctgctcatgtcccgcaatgaagaagctactaagcacctagag
acaagtaagcaattggcagcagcattccaagaggagtttacagttcgagaggacctgatg
ggtctggcaattgggactcacggtgccaacatccagcaggctcgaaaagtgccaggagtg
actgccattgagttgggtgaagagacctgcactttccgaatctatggggagacgccagag
gcatgcagacaggctcgaagctaccttgaattttctgaggactctgtacaagtgcccagg
aacctggttggcaaagtgattggaaagaacgggaaagtgattcaggagatcgtggataag
tctggtgtggtgcgggttcgtgtggaaggtgataacgacaagaagaaccccagggaggag
ggaatggttcccttcatatttgttggcacccgagagaatatcagcaatgcccaggcactg
ctagagtatcacctctcctacctgcaggaggttgaacagcttcgcttggagagactgcaa
attgatgaacagcttcggcagattgggctaggctttcgccctcctgggagtggacggggt
ggcagtggtggtggcagtgacaaggcgggctataccacagacgagagctcctcctcttcc
ctgcacacgaccagaacctatgggggcagctatgggggccggggccggggccggaggact
ggtggtcctgcctatggccccagctcagacccctccacagcttctgagacagagtcagaa
aagagagaggaatctaatcgagcaggacctggtgacagagatcccccaagccgtggagaa
gaaagcaggaggcggccaattgggggccggggaaggggacccccacctgttccccggcct
acctcaagatacaactcatcatctattagctcagtgctaaaggatccagacagcaaccct
tacagcctattggacacatctgaaccagagcctccagttgattcagaacctggtgaacct
cctccagcaagtgcccgtcgtcgccgttcccgccgccgtcgtactgatgaagacaggact
gtcatggacggaggcctggagtctgacggtcctaacgtgacagagaatggcctggaagat
gaatcaagaccccagagacgtaatcgcagccgccgccgccgtaatcgtggtaaccggact
gatgggtccatcagcggagaccgccaaccagtgactgtggctgactacatctcacgggca
gagtctcagagccgccagcggccacctctggagcgcacaaaaccctcagaggattctctt
tcaggacagaagggtgactctgtcagcaggcttcccaagggcccctcagagaatggggag
ctctctgccccattggagttgggtagtttggtgaatggggtttcataa
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