KEGG   Rattus norvegicus (rat): 287608
Entry
287608            CDS       T01003                                 
Symbol
Supt4h1
Name
(RefSeq) transcription elongation factor SPT4
  KO
K15171  transcription elongation factor SPT4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    287608 (Supt4h1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    287608 (Supt4h1)
   03019 Messenger RNA biogenesis [BR:rno03019]
    287608 (Supt4h1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     287608 (Supt4h1)
  RNA polymerase I system
     287608 (Supt4h1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     287608 (Supt4h1)
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 287608
NCBI-ProteinID: NP_001099298
RGD: 1306372
Ensembl: ENSRNOG00000007845
UniProt: F7F5Z5
LinkDB
Position
10:73036560..73042821
AA seq 117 aa
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI
IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
NT seq 354 nt   +upstreamnt  +downstreamnt
atggccctggagacggtgccaaaggacctgcggcatctgcgagcttgtttgctgtgctcg
ttagtcaagactatagaccagtttgaatatgatgggtgtgacaattgcgatgcataccta
caaatgaagggcaacagagagatggtgtacgactgcaccagctcttcatttgatggaatc
atcgcgatgatgagtccagaggacagctgggtctccaagtggcagcgcgtcagtaacttt
aagccaggtgtatatgctgtgtcagtcactggtcgtctgccccaaggaattgtgcgggag
ctgaaaagtcgaggagtggcctacaaatcgagagacacagcaataaagacctag

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