Rattus norvegicus (rat): 287643
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Entry
287643 CDS
T01003
Symbol
Spop
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
287643 (Spop)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
287643 (Spop)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
287643 (Spop)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
287643
NCBI-ProteinID:
NP_001093966
RGD:
1311613
Ensembl:
ENSRNOG00000004686
UniProt:
A6HIA2
A0A8I6GAF0
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All DBs
Position
10:80854890..80935781
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVLETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttccaagtcctccacctccggcagaaatgtcgagtggtcctgttgctgag
agctggtgctatacacagatcaaggtagtgaagttctcctacatgtggaccatcaataac
tttagtttttgccgggaggaaatgggtgaagtcataaaaagttcaactttttcatcagga
gccaatgataagctgaaatggtgtttgcgagtaaacccgaaggggctggatgaggaaagc
aaagattacctgtcgctctacctgttgttggtcagctgtccaaagagtgaggttcgggcc
aagttcaagttctccatcctgaatgccaagggagaagaaaccaaagctatggagagccag
cgagcttataggttcgtgcaaggcaaagactggggattcaaaaaattcatccgtagagat
tttctcttggacgaggccaatggacttctccctgatgacaagctcaccctcttctgcgag
gtgagtgtagtccaagactctgtcaatatctctgggcagaacactatgaacatggtaaag
gtccctgaatgccggttggctgacgagttaggagggctgtgggagaactctcgattcaca
gactgctgcttgtgtgtggctggccaagaattccaggctcacaaggctatcttagcagct
cggtctccagttttcagtgccatgtttgaacatgaaatggaggagagcaaaaagaatcgg
gttgaaattaacgatgtagaacctgaagtttttaaggaaatgatgtgcttcatctacacg
gggaaggcaccaaaccttgacaaaatggctgatgatttgctggcagctgctgacaagtac
gccctggagcgtttgaaggtcatgtgcgaggatgccctctgcagtaacctctctgtggag
aacgctgcagagattctcatcctggctgacctccacagcgcagatcagctgaaaacccag
gcagtggatttcatcaactatcatgcttcggatgtcttggagacctctgggtggaagtca
atggtggtgtcacatccccacttagtggcagaagcgtaccgctctctggcttccgcacaa
tgccctttcctggggcccccgcgcaaacgcctgaagcaatcctaa
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