Rattus norvegicus (rat): 287727
Help
Entry
287727 CDS
T01003
Symbol
Dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
287727 (Dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
287727 (Dhx8)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
287727 (Dhx8)
Spliceosome [BR:
rno03041
]
Complex C
Other components
Step II factors
287727 (Dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
Sigma54_activ_2
PhoH
TsaE
ABC_tran
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
287727
NCBI-ProteinID:
NP_001400156
RGD:
1310723
Ensembl:
ENSRNOG00000020772
UniProt:
A6HJF0
LinkDB
All DBs
Position
10:87167861..87204426
Genome browser
AA seq
1242 aa
AA seq
DB search
MAVAVATAGVLMGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEEDVKVAVDVLKELEALMPSAAGQEKQRDTEHRDRTKKKKRSRSR
DRDRDRDRDRDRDRDRDRDKDRERDRDRERDRERDRDRDHKRRHRSRSRSHSRTRERAKG
KSRYRSRSRSQSPFKDRKDREKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQF
GCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDV
DQETGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPE
KWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMD
MSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEG
RQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAV
HDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCL
GQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLF
GLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLD
ASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPS
EMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTP
ISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIN
DLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVH
LGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFS
NPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKK
DPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAP
AFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccgtggccaccgccggggtcctaatgggctcggaacctggcccggcggaa
gagctcgctaaactcgagtacctgtctttggtgtcaaaggtttgcacggagctggacaat
catttgggcatcaacgacaaggatctggctgaatttgtcatcagtcttgctgagaaaaat
actacctttgatacttttaaggcttctctggtcaaaaatggtgcagaattcacagattct
cttattagcaacctgttgcgtctcatacaaactatgcggcctccagcaaagccttctact
agtaaagatcccgttgttaaacccaaaactgaaaaagaaaagctgaaggaactcttccct
gtcctttgccagccagacaacccttcagttcggaccatgttggatgaagaagatgtgaaa
gttgctgtggatgttttgaaagagctggaagctttaatgcccagtgcagcaggccaagag
aaacaaagagacactgagcacagggacaggacaaagaagaagaagaggagtcggagccga
gatcgtgatcgtgatcgagaccgggacagggaccgagaccgggacagggaccgtgacaag
gaccgagaacgagatagagatcgagaacgagacagagagcgagatagagatagagaccat
aagcggagacaccgatcacgctctcggtcacattctaggacccgggagagggctaagggg
aaatctagatacaggtctaggagcagaagtcagagtcccttcaaagatcggaaagaccgg
gaaaagtatggggagaggaatctggacagatggcgggataagcatgtggaccgccctcct
cctgaagagcctgccattggagacatttacaatggcaaagtgaccagcatcatgcagttt
ggctgcttcgtgcagctggaaggcctaaggaagcggtgggaaggcctggtgcacatttct
gagcttcgacgggaaggtcgagtggccaatgtggctgatgttgtgagcaaaggccagagg
gttaaggtcaaagttctgtccttcactgggaccaagaccagcctgagcatgaaggatgtg
gatcaagaaacaggagaagatctaaacccaaacagacgcagaaatctggttggggagacc
aacgaagagacgtcgatgcggaacccagaccgacccacccacctctccctcgtcagtgct
cctgaagtagaggacgactcactggagcgcaagcggctcacccgcatctctgacccagag
aagtgggagatcaaacagatgattgctgccaatgtgctttccaaagaagagtttccagac
ttcgatgaagagaccggcattctccctaaggtggatgatgaagaagatgaggatcttgaa
attgaacttgttgaagaggagcctccgttcctgagagggcacaccaagcagagcatggac
atgagccccatcaaaatcgttaagaacccggatggctccctctcccaagcagccatgatg
cagagtgccctggccaaagaaaggcgggagctgaagcaggcccagcgggaagcagagatg
gattctatacccatggggctcaacaaacactgggtggaccccttgcctgatgcggaaggc
aggcagatcgctgccaacatgagggggattgggatgatgcccaatgacattcctgagtgg
aagaagcatgcctttgggggcaacaaagcttcttacgggaagaagacccagatgtcaatc
cttgagcagagagagagcctgcctatctacaaactgaaggaacagctggtgcaggctgta
catgacaatcagatcctaattgtaatcggagagacaggatctgggaagacaacacagatc
acccagtacctggcagaggcaggctatacttccaggggcaagattgggtgcacccagccc
agaagagtggcagctatgtctgtggccaaaagagtatcagaggaatttggttgttgcctt
ggtcaagaggtaggctacaccattcgatttgaggattgcaccagcccagaaacagtcatc
aagtacatgacagacggcatgctgctcagagagtgcctgattgatcccgatctcactcag
tacgccatcatcatgctggacgaggcacatgagaggactattcacacagatgtgctcttt
gggttgttgaaaaagacagttcaaaaacgacaagacatgaagctgattgtcacctcagcc
accctggatgcagtgaagttttctcagtacttctatgaagcacccatcttcacaatccct
ggtcgaacctatccagtggagattctgtacacaaaggagcccgaaacagactacttggac
gccagcctgatcacagtcatgcagatccacctgacagagccgccaggtgacatcttggtt
tttttgactggtcaggaagagatcgatactgcttgtgagatcctgtatgaaagaatgaag
tcactgggacctgacgtcccagagttgatcatcctcccagtgtactctgctcttccgagt
gagatgcagacccgaatctttgatccagctcctcctggcagcagaaaggtggtgattgcc
accaacattgcagaaacatctctgaccatcgacggcatctactatgtggtcgaccctgga
tttgtgaagcaaaaagtttacaattctaaaacagggattgaccagctcgtggtgacacct
atttctcaggctcaagcaaagcagagagctggcagagctgggagaaccggcccaggcaag
tgttacaggctgtacacagagcgtgcctaccgggatgaaatgctgaccaccaatgtgcca
gaaatccagagaaccaacctggccagcacagtgctgtccctcaaggccatgggcattaat
gacctgctgtcctttgacttcatggatgcgccaccgatggaaactctgatcacagccatg
gagcaactgtatacgctgggggccctggacgatgagggcctgctcactcgccttggccgc
aggatggcagagttccctctggagccaatgctctgcaaaatgctcatcatgtctgtgcat
ctgggctgcagcgaagagatgctaactattgtgtccatgctgtctgtgcagaacgtcttc
taccgacccaaggacaagcaggcccttgcagatcagaagaaggccaaattccaccagaca
gaaggggaccatctcaccctgctggccgtgtacaattcctggaagaacaacaaattctcc
aacccatggtgctatgagaacttcatccaggctcgttccttacgccgggcccaggacatt
cgaaagcagatgttaggcataatggacaggcacaagctggatgtggtctcctgtggtaaa
tccacagtgcgagtgcagaaggccatctgcagtggcttcttccggaatgctgccaagaag
gacccccaggagggctaccggacattgattgaccagcaggtggtctatatccatccttcc
agtgctcttttcaacagacagcccgaatgggtggtataccatgaactggtgctgaccaca
aaggagtacatgcgtgaggtcaccaccatcgacccccggtggcttgtggagtttgctccg
gctttcttcaaagtctctgacccaaccaagctaagcaagcagaagaagcagcagcgcctg
gagcctctgtacaatcggtatgaggaaccgaacgcctggagaatctcccgtgctttccgg
cggcgctga
DBGET
integrated database retrieval system
