Rattus norvegicus (rat): 287765
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Entry
287765 CDS
T01003
Symbol
Ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
rno05202
Transcriptional misregulation in cancer
rno05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
287765 (Ddx5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
287765 (Ddx5)
05205 Proteoglycans in cancer
287765 (Ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
287765 (Ddx5)
03009 Ribosome biogenesis [BR:
rno03009
]
287765 (Ddx5)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
287765 (Ddx5)
Spliceosome [BR:
rno03041
]
Complex A
U1 snRNP components
U1 related factors
287765 (Ddx5)
Complex B
287765 (Ddx5)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
Pre-60S particles
Helicases
287765 (Ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
287765
NCBI-ProteinID:
NP_001007614
RGD:
619906
Ensembl:
ENSRNOG00000030680
UniProt:
F7F4F8
Q6AYI1
LinkDB
All DBs
Position
10:complement(92224393..92231928)
Genome browser
AA seq
615 aa
AA seq
DB search
MSSYSSDRDRGRDRGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMHNGMNQQAYAYPATAA
AAPMIGYPMPTGYSQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagttattctagtgaccgagaccgcggccgggatcgagggtttggtgcacctcga
tttggagggagtagaacaggacccctatctggaaagaagtttggaaatcctggggagaaa
ctagttaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcag
gaacaccctgatttggcaaggcgcaccgcacaagaggtagatacgtacagaagaagcaag
gaaattacagtcagaggtcacaactgtccaaaacctgttctgaatttttatgaagcaaac
tttcctgcaaatgtcatggatgtgattgcaaggcagaacttcactgaacccactgctatc
caagctcagggctggccagttgctctcagtggattggatatggttggagtagctcagact
ggatctgggaaaacattatcttatttgctgcctgccattgtacacataaaccaccagcca
ttcttagagagaggtgatgggcctatttgcttggtgctggcaccaactcgagaactggca
cagcaggtgcagcaggtcgctgctgaatattgtagagcttgtcgcttgaagtctacttgc
atctatggtggtgctcccaaaggaccgcagattcgtgatttggagagaggtgtggaaatc
tgtattgcaacacctggaagactgattgactttttagagtgtgggaaaaccaatctgaga
agaacaacttaccttgtccttgatgaagctgataggatgcttgatatgggctttgaaccc
caaataaggaaaattgtggatcaaataagacctgataggcaaacactaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatatc
aatattggtgcactggaactgagtgcaaaccataacattcttcagattgtggatgtgtgt
catgatgtcgaaaaggatgaaaaacttattcgtctgatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgccatgggcatccatggtgacaagagtcaacaggaacga
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctaccgatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttactcccaataacataaagcaagtgagcgacctcatctctgtgctt
cgggaagccaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgatcgtcgtgacagatactctgcaggg
aaaaggggtggatttaatacctttagagacagggaaaactatgacagaggctactctagt
ctgcttaagagagattttggggctaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtatctgctggcatacagaccagttttaggact
ggtaacccaacagggacttaccagaacggttatgatagcactcagcaatatggaagtaat
gttgcaaatatgcacaatgggatgaaccaacaggcatatgcatatcctgctaccgcagct
gctgcgcctatgattggctatccaatgccaacagggtattctcaataa
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