Rattus norvegicus (rat): 287788
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Entry
287788 CDS
T01003
Symbol
Abca9
Name
(RefSeq) ATP-binding cassette sub-family A member 9 isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
rno
Rattus norvegicus (rat)
Pathway
rno02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
287788 (Abca9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
287788 (Abca9)
Transporters [BR:
rno02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
287788 (Abca9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
AAA_22
MMR_HSR1
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
287788
NCBI-ProteinID:
XP_038943368
RGD:
1305931
Ensembl:
ENSRNOG00000059326
LinkDB
All DBs
Position
10:complement(95577079..95638706)
Genome browser
AA seq
1653 aa
AA seq
DB search
MKFLKISASAFLRTFTSTSLKSFKKNKQVKMRKRRLRLGQQMWALLCKNWLRKFRMRRET
LLEWLLSFLLILLAYQLSSNLHQVHDAPEMSMMDLGRVDDFNDSNYIIVFAPESETTHEI
MNIAALAPFMKGRTIVACPDESSMSELNLNYSIDAVRVIFKDTFSYHLKFSWGQRIPKTK
EHKDHTAPCEPFKNKMVCENSVFWEKGFVAFQTAINAGIIEVTTNHSVMEELMSVIGSVM
KMQPFIAQGGVATDFFIFFCVISFSSFIYYLSVNVTQERQSITTLMAMMGLRESAFWLSW
GLMYAGFILVVATLMSLIVKSTQVVVLTGFMVVFLLFLLYGLSLITLSFLMSVLLKKPFL
TGLAVFLLTVFWGSLGFTALYKHLPAFMEWILCFLSPFAFINGMAQLIHLDYDVNSNVNL
NSPNNSYLILATLFMLVLDALLYLALALYFDKILLSKYGHQRSPLFFLKSSYWFQRRGAD
HVVLENEIDSAPSLNDSLEPVSPEFQGKEAIRIKNLRKEYTGKHGKVEALRGLGFDIYEG
QITALLGHSGAGKTTLINTLSGLSPPTTGSITIYNQTVSETEDSYAVPKLTGVCPQSNIQ
FGFLTVQENLRLFAKIKGILPQEVEQEVRQVLRDLEMENIQDTLAQNLSGGQKRKLTFGI
AILGDPQVLLLDEPTAGLDPLSRHHIWNLLKERRSGRVIVFSTQFMDEADILADRKVFIS
NGRLRCAGSSLFLKKKWGIGYHLSLHLNETCDPESITSLVKKHIPDARLTAQSDEQLVYI
LPLERTNKFPDLYRDLDRCSNHGIEDYDVSMTTLNEVFLKLEGKSMAEEPDAGVCGRLLS
DGAKDVESLVELERVLPLDSSGSSVSGMALWRQQLCAVAKVRFLKLKNERRSLMTMLLLF
GISFVPQLLEHLVYKVYHKSYSWGLSPSMYFLSPGQLPQDPLTHLLVINKTGSSIDNFIH
SLRQQGIALDVDALGTRNGKEEALYNGAVTVLGDEKDLRFSVACNAKRLNCFPVLADILS
NGLLGIFNSSERIQTDRSTVFEDHMLYEYGFMSNAFFWIPVAASLTPYIAMGSISDHKKK
VLSQLWTSGLYPSAYWCGQALVDIPIYFLILLLMQIMDSVFSSEEIMSVIESLLIQIPCS
IGYASSLIFLTYVISFVFRNGRKNSGIWSFFFLIVTIFFIVATDINEYGFLQLLFCTLLI
PPFTLIGSLLIFSEVSYDSVDYLGSSESQLVFLALLIPYLHFLLFFFILRCLERYIRKKT
LRVDPVFRISPRSCRAFPNPEDPGEEDEDVQMERVRTSGAMTTPQMDEKPVIIASCLRKE
YTVKTKRCFSKTKKKIATRNISFCVKKGEVLGLLGHNGAGKSTTISMITGDTVPTAGQVF
LKGSSGSAALGFLGYCPQENVLWPNLTVKEHLEVYAAVKGLRKKEAIVTITRLVNALKLQ
DQLKALVKTLSEGVKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFTNTE
RGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKLKTPALVESL
NTEILRLFPQAARQERYSSLMVYKLPVEDVRPLSEAFFKLERLKENFDLEEYSLSQSTLE
QVFLELSKEQELGDFDEEGSSSVKWKLLPQEEL
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttgaagatttctgcttcagctttcctcagaactttcacatctacttccttg
aagtcctttaaaaaaaataaacaagtcaaaatgaggaagagacgcttgagactgggtcag
caaatgtgggctcttctctgcaagaactggctcaggaagttcaggatgagaagagagacg
ctcctggaatggcttctctcatttctcctaatactgttggcatatcaattatcctccaat
ttgcatcaagttcacgacgctcctgaaatgtctatgatggatctgggacgtgttgatgac
tttaacgattctaattatattattgtgtttgctcctgagtctgaaaccacccatgagata
atgaacatagcggccttagctccattcatgaaaggaaggacaatcgtggcgtgtcctgac
gaaagcagcatgagtgaactcaatttaaactattcaatagatgcagtgagagtcatcttt
aaggatacgttctcatatcatttgaaattttcatggggtcagaggatccctaagacgaaa
gaacacaaagaccacacagctccttgtgaaccattcaagaacaaaatggtttgtgaaaat
tcagtcttctgggaaaagggctttgtagcctttcagactgccattaatgctggcatcata
gaggtgacaacaaaccactcggtgatggaagagctgatgtcagtgattggttcggttatg
aagatgcagccttttattgcccaaggaggagtcgccactgacttctttattttcttctgt
gttatttccttttcttcattcatatactatttatcagtcaacgttacccaggaaaggcaa
tccattacaacattaatggcgatgatgggtcttcgagagtctgctttctggctttcctgg
ggtctgatgtacgctggctttatccttgttgtggctactttgatgtctcttattgtgaaa
tccacccaagttgtcgtcttaactggtttcatggtggtgttcctcctgtttctcctttat
ggcctgtctttgataactttatctttcctcatgagtgtgttgttaaagaaaccatttctt
actggcttggctgtcttcctccttaccgtcttctggggaagcctgggattcacagcattg
tacaaacatcttcctgcttttatggaatggatattgtgttttcttagcccctttgccttt
attaatggaatggcccagcttatacatttggactatgatgtgaattctaatgtaaatttg
aactctccaaacaactcgtacctaatcctggccaccctcttcatgttggttttggatgct
cttctctatttggcactggcattgtattttgacaagattttactcagtaagtacggacat
cagcgttctccgttgtttttcctgaagtcatcttactggtttcaacgcagaggagctgat
catgtggtccttgagaatgaaatagactctgctccttcactcaatgactcattggaaccc
gtgtctccagaattccaggggaaagaagctatcaggatcaaaaatcttagaaaggaatat
acaggaaagcatggaaaagtagaagccttaagaggtctgggatttgatatatacgaaggc
cagatcactgcccttcttggtcatagtggagctgggaaaaccaccctgataaacacactc
agtggactgtcacctcctactacaggctccatcaccatttataatcagacagtttcagag
acggaggactcctacgctgtccccaagctcactggagtttgcccacaatccaacatacag
tttggtttcctcactgtgcaggagaatctcaggctttttgccaagataaagggaattctg
ccgcaggaagtggagcaagaggtacgacaagttttacgggacttagaaatggaaaatatc
caagacactcttgctcagaatttaagtggaggacaaaaaaggaagctgacttttgggatc
gccattttaggagacccccaggtcttgctactggatgaaccaaccgctgggttggacccg
ctctcaaggcatcacatttggaacctactgaaagagcggagatcaggcagagtaattgtc
tttagtactcagttcatggatgaagctgatatcctggctgacaggaaggtgtttatatcc
aacgggagactgaggtgtgcaggctcttctctgtttctgaagaagaaatggggcatcggc
tatcacctaagtttgcatttgaatgaaacttgtgatccagagagtataacatcactggtc
aaaaagcacataccggacgccagactgactgcacaaagcgacgaacagcttgtctatatc
ttgcccctggaaaggacaaacaagtttccagacctttacagggaccttgacagatgctct
aaccacggcattgaggattatgatgtttccatgacaaccctgaatgaggtgttcctgaag
ttagaggggaagtccatggctgaggaaccggacgctggagtttgtggtcgcttgctaagc
gatggggcaaaagatgtggaaagccttgttgagctggagcgagtgttgcctctcgattca
tcagggagctcagtgagcggcatggcgctgtggaggcagcagctctgcgcagtcgcgaag
gtccgcttcctcaagctcaagaacgaacgaagaagtctgatgaccatgttattgcttttt
ggcattagctttgtgccccaacttttggaacatctagtctacaaggtataccacaaaagt
tactcgtgggggctgtctccaagtatgtatttcctttcaccaggacagttaccacaggat
cctctgacccacttactggtcatcaataaaacaggttcaagcattgataactttatacat
tcactaagacagcagggcatagcattagacgtggatgccctggggaccagaaatggcaaa
gaagaggctctgtacaatggtgctgtcacagtgctgggtgacgagaaggacctcagattt
tctgtagcgtgtaatgccaaaagactaaactgctttccagtcctcgcggatatccttagc
aatgggctgcttggaatttttaactcttcagagcgcatccagaccgacagaagcacagtc
tttgaagaccatatgctttatgagtacggattcatgagcaatgcatttttctggatacca
gtggctgccagcctcaccccttacattgcgatgggcagcatcagcgaccacaaaaaaaaa
gttctttcccagctgtggacttcaggcctttacccatctgcttactggtgtgggcaggct
ctggtggatattcccatatacttcctgattctcctcctcatgcaaataatggacagtgtt
ttcagttcggaggagatcatgtctgtgattgagagcctgttgattcaaataccgtgcagt
attggatatgcgtcatcgctcatattcttgacatatgtgatttcattcgtttttcgtaat
ggcagaaaaaatagtggcatctggtcatttttcttcctaattgtcaccatcttcttcata
gttgctaccgacataaatgagtatggctttctacagctgctcttctgtacccttttaata
cctcccttcacactgattggctctctattaattttttctgaggtctcttacgactccgtg
gattacttaggatcatcagaatctcaacttgtatttctggcattgctgataccttacctt
cattttctccttttctttttcatcctgcgatgtctggaaagatacatcaggaagaagacg
ctgagagtggaccctgtgttcaggatttctccgagaagctgccgtgcttttccaaaccca
gaagatcctggagaagaggatgaagatgttcagatggaaagagtgagaacgtcgggcgcc
atgacaaccccacagatggacgagaaaccagtcatcatcgcgagctgtctgcggaaggaa
tatacagtcaaaacgaaaaggtgcttttccaaaacgaagaaaaagattgccacaaggaac
atctccttctgtgtcaaaaaaggtgaagtcctagggctcttaggacacaatggagctggc
aaaagtacaaccattagtatgataacgggagacacagtaccaaccgcaggtcaggtgttt
ttgaaagggagtagtggcagtgctgccctcgggttcttggggtactgccctcaggagaat
gtgctgtggcccaacctgaccgtgaaggaacatctggaggtgtatgccgctgtgaagggg
ctgaggaagaaggaggctatagtcaccatcacacggttggtgaatgccctcaaactgcag
gaccagttgaaagctcttgtcaagaccctgtcagagggagtgaagagaaagctttgtttt
gtgctgagcatcctggggaacccttctgtggtgctgctggatgagccgtcaactgggatg
gaccccgaggggcagcagcaaatgtggcaggcgatccgggccacttttacaaacacagag
aggggcgccctcctgaccacccactacatggcagaggctgaggctgtgtgtgaccgagtg
gccatcatggtgtctgggaggctgaggtgtattggttctatccaacatctaaagagcaaa
ttcggcaaagattacctgctggagatgaagttgaagaccccggctctggtggagtcgctc
aacacggagatcctgaggctcttcccccaggctgctcggcaggaaaggtactcttctctg
atggtctataagttgcctgttgaggatgtacgacctttgtccgaggctttcttcaaattg
gagagactgaaagagaactttgacttggaagaatacagcctctcacagtccactctggag
caggtcttcctggagctctccaaggagcaggagctgggtgatttcgatgaggaaggcagt
tcctcagtgaagtggaagctcctcccacaggaagagctttaa
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integrated database retrieval system
