Rattus norvegicus (rat): 287824 Help Entry 287824            CDS       T01003                                  Symbol Trim80 Name (RefSeq) tripartite motif protein 80   KO K10652   tripartite motif-containing protein 25 [EC:2.3.2.27] Organism rno  Rattus norvegicus (rat) Pathway rno04064   NF-kappa B signaling pathway rno04622   RIG-I-like receptor signaling pathway rno05164   Influenza A Brite KEGG Orthology (KO) [BR:rno00001]  09130 Environmental Information Processing   09132 Signal transduction    04064 NF-kappa B signaling pathway     287824 (Trim80)  09150 Organismal Systems   09151 Immune system    04622 RIG-I-like receptor signaling pathway     287824 (Trim80)  09160 Human Diseases   09172 Infectious disease: viral    05164 Influenza A     287824 (Trim80)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rno04121]     287824 (Trim80) Enzymes [BR:rno01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      287824 (Trim80) Ubiquitin system [BR:rno04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRIM/RBCC proteins     287824 (Trim80) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-C3HC4_4 SPRY zf-RING_UBOX RING_XB3-XBAT31 zf-B_box zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 EGF_integrin zf-Nse zf-Tbcl_FmdE Sina_RING zf-RING_6 Motif Other DBs NCBI-GeneID:  287824 NCBI-ProteinID:  NP_001395539 RGD:  1311352 Ensembl:  ENSRNOG00000028812 LinkDB All DBs Position 10:101181797..101190122 Genome browser AA seq 623 aa AA seqDB search MKQQPQRTVRRRRSPVHRAAKYLAVIDMQKISRPTQDKSPSELSTQSSRTSLQLLMSSNS SQHLLEDQVLCPICLDVFRNPVTTACGHNFCMTCLQSFWDHQADTGETYYCPQCREAFPS RPRLCKNVILGEMVACFTLAKSQTSGPLWGLAGPTDVPCDFCSPQKLKATKSCLQCMASL CEKHLHSHFEDPLFQEHQLLDPVWDLKNRLCRKHRKLRQMYCRTEGSCVCGACLLEEHQN HDTTPLEDERARKEVEVRKIQANVENQMLIIASDSQKHQGRVSFLSKLIQTMREEVNTCF SEILHEVKQLQMKVLDFVENEETVALGMLGNSMQQSHSRLLKLEGDSVWLHGLLANKSDE QFLQEFPTLKHFPACVEPLLGTNCEETQSFLQLPETLAQLRIRLMDIGLNFINQLLLKGI RMNSYEVLPATVDRKTLLQNYCNLNFDSSMASEELFLFKETHSVLNLGILLEPSTTSPLP GFKQWPQVLCCPGLSEGCHYWETEVSDSWMCLGVTYRRNPSMSGRHRRNIVYLLGRNPYS WCLEWDSLKFSVWHNNTQTVLHGSYHHTLGVALDFRAGCLSFYGVAGDVSLLYRFLTSFL EPLYPAVMVSSGASLTLKQYPEA NT seq 1872 nt NT seq  +upstreamnt  +downstreamnt atgaaacagcagccacagagaacggtgagaagacggcggtcaccagtccacagggcagcg aagtatctggctgtcatagacatgcagaagatctcacgaccaacccaggacaaatccccc tcagagctctctacccagtcctccagaacctcactccagctcctgatgagcagcaacagc agtcaacacttgttggaagaccaagtcctctgtcccatttgcctggatgtgttccgcaac ccggtcaccaccgcctgcggccacaacttctgcatgacatgccttcagagtttctgggac caccaggctgacactggagagacttactattgcccccagtgcagagaggcctttccgagc aggccccgcctctgcaagaacgtcattctcggagagatggtggcttgtttcaccctggcc aagagccagacctcagggcccttgtggggcctggctggccccacagatgtgccctgtgac ttttgctctcctcagaagctgaaggcaaccaagtcgtgcctgcagtgcatggcttccttg tgcgagaagcatctgcacagccattttgaggacccgttgttccaggaacaccagctgttg gacccggtgtgggacctcaagaaccgcttgtgccgtaagcatcgcaagctccggcagatg tactgccgcaccgagggcagctgcgtgtgcggggcctgcctcctggaggagcaccagaac cacgacacaaccccgctggaggatgaacgggcccgcaaggaggtggaagttcggaagatt caggccaatgtggagaatcaaatgctaatcattgcctcggacagccagaaacaccaggga cgagtgagtttcctctcgaaactgattcagacgatgcgagaagaggtgaacacctgcttc tcagagatcctccatgaggttaaacagctgcagatgaaggtcttggattttgtggagaat gaggagacagttgccctgggaatgctgggtaactccatgcaacaaagccacagccggctc ctgaagttggagggggacagcgtctggctccacggcctgctggccaacaagagcgatgag cagtttctacaggagttccccacactgaagcacttccctgcctgcgtggaacccttacta ggcaccaactgtgaggagacacagagcttcctccagctgccagagaccctggcccagctc cgcatcaggctgatggacataggtcttaacttcatcaaccagctgctcttgaagggcatc aggatgaactcctatgaggtgctgccagcaactgtggacagaaagacactactccagaat tactgcaacctgaactttgactcctccatggccagcgaagagctgttcttgttcaaggaa acgcactcggtgttgaacttgggcatccttctggagccctcgaccaccagccctttaccg ggcttcaagcagtggccccaggttctgtgctgcccaggcctgtcggaaggctgtcactac tgggagaccgaggtgtccgactcgtggatgtgcctgggagtcacctaccgtcgcaaccct tcgatgagcggtcgccaccgtcgcaacatcgtctacctgctgggccgcaacccctattcg tggtgtctggagtgggactctctcaagttctccgtgtggcataacaacacgcagacggtg ctgcacggctcctaccaccacacgctcggcgtagcgctggacttcagggccggctgcctg tccttctatggcgtggcgggcgacgtgagcctgctctaccgcttcctcacctccttcctc gaacctctgtaccccgcggtcatggtcagcagcggagcctcgctcacactcaagcagtac cccgaggcatag

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