Rattus norvegicus (rat): 287990 Help Entry 287990            CDS       T01003                                  Symbol Vps8 Name (RefSeq) VPS8 subunit of CORVET complex   KO K20178   vacuolar protein sorting-associated protein 8 Organism rno  Rattus norvegicus (rat) Pathway rno04148   Efferocytosis Brite KEGG Orthology (KO) [BR:rno00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     287990 (Vps8)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rno04131]     287990 (Vps8) Membrane trafficking [BR:rno04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     287990 (Vps8) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps8 Clathrin zf-RING_11 zf-RING_2 zf-RING_UBOX zf-C3H2C3 zf-RING_5 PHD zf-C3HC4 Motif Other DBs NCBI-GeneID:  287990 NCBI-ProteinID:  NP_001414549 RGD:  1309443 Ensembl:  ENSRNOG00000001764 LinkDB All DBs Position 11:complement(92906702..93140844) Genome browser AA seq 1428 aa AA seqDB search MENEPGQENLEQNPCARTVEEELNKSFNLEASLSKFSCIDLDKELEFKNDLIDDKEFDIP QVDTPPTLESILNETDDEEESFVLEDPTLLNVDTIDSHSYDTSSVASSDSGDRANLKRKK KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ NQALRLCLGSTSVGEQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVS NCVNPMLAFCRGDTVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDSVE KLHVIDRQTQEELETMEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG QIFYLGTKSVYVMMLRSWRERMDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVSKRK AVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDTVPVIVDYCLLLQRKDLLFSQMY DKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMDIT SLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFKVIAPPLNAGKTLTDEQVVMG NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSVEASSEEEVYPYVRTLLH FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK AEFYQICEFMYEREHQYDKIIDCYLHDPLREEEVFNYIHNILSIPGHSAEEKQSVWQKAM DHMEELVSLKPCKAAELVATHFSGQIEVVIGQLQNQLLLFKFLRSLLDPRERVHISQESL QIPPCVTEQFIELLCQFSPDQVIETLQVLDCYHLEETIQITQKYQLHEVTAYLLEKKGDV HGAFLLLLERLQSRLQEMTRQNENTKEDIQLKAVEDTMVETIALCQRNSQNLNQQQREAL WFPLLEAMMAPQKLSSSAAAPPHPHCEALKSLTMQVLNSMATFIALPSILQRILQDPIYG KGKLGEIQGLILGMLDTFNYEQTLLETTASLLNQDLHWSLCNLRASVSRGLNPKQDYCSI CLQQYKRRQETADEIIVFSCGHLYHSFCLQSKECTLETEGQTRWTCYKCSSSNKAGKLSE NPSESKKGRITSPQIKMSPSYHQSKGDPPARKANSEPVLDPQQTQAFDQLCRLYRGGSRL ALLMELSQNRGGDSYRPFAGSQSGPAFNSIFQKENFQLQLAPPPVAED NT seq 4287 nt NT seq  +upstreamnt  +downstreamnt atggaaaacgaaccaggccaggagaatttggaacagaacccgtgcgccaggactgtggaa gaagagttgaacaagtcttttaatttagaagcttccctttcaaaattctcttgcatagat ctggacaaggagctggagttcaaaaatgatctgatcgatgacaaggagtttgatattcct caggtggatactcctccaactctggagagcattcttaacgagacggacgatgaagaggag tcttttgttctggaggaccctacattgttaaacgtcgacaccatcgactctcactcctat gacacctcatctgtggcaagctcagacagtggcgacagggccaacctaaagaggaagaag aagttaccggattctttctccctgcatgggtcggttatgcgacattcactcctaaagggg atatctgcacagatcgtgtcggcagccgacaaagtagatgctggcttgccgacagcaatt gcagtgtccagtctgatcgcggtgggaacatctcacggattggctttaatatttgatcag aatcaagcgctgcggctctgtctgggcagcactagcgttggggagcagtatggagccatc tctgccctcagtatcaacaacgactgctcaagactcctctgtggctttgctaaaggacag atcaccatgtgggatttggccagtgggaaacttctcagatcaataacagatgctcatcct ccagggaccgcgatcttgcacatcaagttcacagatgatccaactcttgcgatttgcaac gacagtggaggctctgtttttgagctaacatttaagagagtcatgggcgtgagaacgtgt gagtctaggtgtctgttcagcggctccaagggtgaagtctgctgcatcgagcccctgcat tccaagcccgagttgaaagaccatcccatcacacagttctcactgctggccatggcgtcc ttaacaaagattttggtcattgggttgaaaccgtccctgaaagtgtggatgactttcccc tacggacggatggatccttccagtgtcccgttgctggcctggcacttcgtggcagtgagt aactgtgtgaatcccatgcttgccttctgcagaggcgacactgttcacttcctcctggtt aagagagatgagtctggcgcaatacacgtcaccaagcaaaagcaccttcacctgtactac gacctgatcaacttcacttggataaactcccgcacagttgtgcttttagacagcgtggag aagctccacgtgattgatcggcagactcaggaggaactggagaccatggagatctcagaa gtccagctggtctacaacagcagccacttcaagtcactggccacgggcgggaacgtgagc caggccctggctttggttggagagaaggcttgctaccaatccatcagtagctatggagga cagatcttctatctggggacaaagtccgtttacgtgatgatgctgagaagctggagggag aggatggaccatctcctgaaacaggattgcctcacggaagccttggcccttgcgtggtct tttcatgaaggaaaggcaaaagcagtagtggggctttctggcgatgtcagcaagaggaag gctgtcgttgcagaccggatggtagagattctgttccattatgcagatcgggctctgaaa aagtgcccagaccagggaaaaatccaagtgatggagcagcactttcaggatacggtgcca gtcatagtggactactgccttctgctccagcgaaaggatcttctatttagccaaatgtac gacaaactaagtgaaaattccgtggcgaaaggcgtgtttttagagtgcctggagccatat atcctaagtgataaactggtgggaattacaccccaggtcatgaaagatctgatcgttcat ttccaagataaaaaactaatggagaatgtggaagccctcattgtccacatggacatcacc agcctggacattcagcaggtggttctcatgtgttgggagaatcgtctgtatgacgccatg atctatgtctacaatagaggcatgaatgagtttatcagtccaatggagaagcttttcaaa gtcatcgccccacctctgaatgcagggaagacgctcacagatgagcaagtcgttatgggc aacaagcttctggtgtacatcagctgttgcctggcaggtcgtgcctaccctcttggtgac attcctgaagatcttgtccccttggttaaaaaccaggtttttgagtttctgattcgcctg cattctgtggaagcatcctctgaggaagaagtctatccttatgttcggactttgctacat tttgatacaagagaatttctgaatgtgttggcactgacctttgaggactttaaaaatgat aagcaagccgtagaataccagcagcgcattgtggatattttactgaaagttatggtggag aattcagatttcaccccgtcacaagtggggtgcctctttacattcctcgctcggcagctc gcgaagcccgacaataccttgtttgtgaacagaaccctctttgatcaagtccttgagttc ctctgtagccctgacgatgactcccgccattctgaaagacagcaggtgcttttagaactg ctgcaggctgggggcatcgttcagtttgaagagagtcggctcatccgcatggcagaaaag gcagaattctatcagatctgtgaatttatgtatgagcgagaacaccagtatgacaagatc attgactgctacctgcacgacccgttgagagaggaagaagtcttcaattatatccacaac atcttgtctatccccggtcacagtgctgaggagaagcagtccgtgtggcagaaagcaatg gatcacatggaggaacttgtgtccctgaagccctgtaaggctgcagagttggttgctact cacttctctggacagattgaagtagtcattggacagcttcagaaccagcttttgcttttc aagtttttgaggagtcttcttgatccaagggaacgtgtccacatcagtcaggaatccctg cagatcccaccttgcgttacagagcagttcattgagctcctgtgccagttcagtcctgac caagtcatagagacactgcaagtcctcgactgctaccatctggaggaaactattcagatt acacaaaagtaccagctccacgaagtcactgcatatctgttggagaagaagggggatgtc catggtgccttcctgctgctgctggagaggctgcagagcaggctgcaagagatgacccgg cagaatgaaaataccaaggaggacatccaactgaaagctgttgaagataccatggtagag accattgctctttgccagagaaattcacagaatttgaatcagcagcaacgagaggcgctg tggtttccactgttggaggcaatgatggcaccacagaagctgtccagctcggctgctgct cctcctcatccgcactgtgaggctctgaagtctttgaccatgcaagtcctaaacagcatg gccacgttcatcgccctcccatccatcctacagagaatcctgcaggacccaatttatgga aaaggaaaacttggagagatccagggccttatcctggggatgctggacacctttaactat gagcaaaccttgctagaaacgacagccagcctcctgaaccaggatctccactggtcactg tgtaacctgagagcgtcagtgtccagaggactcaatcccaaacaggattactgttctata tgtttacagcagtacaaaagacgccaagaaacggccgatgagattatcgtcttcagctgt ggccatttgtatcattcgttctgtctacaaagtaaggaatgcaccctagaaactgagggt caaacaagatggacgtgctacaaatgcagctcaagtaacaaagcgggcaaactcagtgag aatccttccgagagtaagaagggacggataacctcgccacagataaaaatgtctccctcg tatcatcagtccaaaggggaccctcctgcccggaaggcaaactcagaacctgttctggac ccacagcaaacgcaagcctttgaccagctctgccggctgtaccgaggaggttctaggctg gctctccttatggaactctcgcagaaccgaggtggcgacagctataggccatttgccggc tcccagagcgggcctgctttcaacagcatcttccagaaggagaacttccagctgcagctt gcacctccacctgtggctgaagactga

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