KEGG   Rattus norvegicus (rat): 288080
Entry
288080            CDS       T01003                                 
Symbol
Stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like
  KO
K08518  syntaxin-binding protein 5
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    288080 (Stxbp5l)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    288080 (Stxbp5l)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    288080 (Stxbp5l)
SSDB
Motif
Pfam: LLGL Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 WD40_Prp19 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40 Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Lgl_C Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_NUP159_NUP214 Synaptobrevin RAB3GAP2_N Beta-prop_VPS8 WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 288080
NCBI-ProteinID: NP_001258179
RGD: 1311561
Ensembl: ENSRNOG00000002496
LinkDB
Position
11:76838839..77167852
AA seq 1185 aa
MKKFNFRKVLDGLTASSPGSGSSSGSNSGGAGSGSVHPGGTAGVLREGIQESLISECFQI
CKTVRHGFPYQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFLI
NEGALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTERGNTHI
VNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKSK
RAELRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQTTVPHGKSQREGRK
SESCKPILKVEYKTCRNSEPFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEFL
TLCETPYPNEFQEPYAVAVLLEKDLIVVDLTQTNFPIFENPYPMDIHESPVTCTAYFADC
PPDLILVLYSIGVKHKKQGYSNKEWPVSGGAWNLGAQTYPEIIITGHADGTIKFWDASAM
TLQMLYKLKTSKVFEKQKVGDGKQTCEIVEEDPFAVQMIYWCPESRIFCVSGVSAYVIIY
KFSRHEITAEIVSLEVRLQCDVEDIITPEPETSPPFPDLSSQLPSSRSLSGSTNTVSSEG
VTKDSIPCLSVKTRPVRMPPGYQADLVIQLVWVDGEPPQQITSLAVSSAYGIVAFGNCTG
LVVVDFIQKTVLLSMGTIDLYRSSDLYQRQPRSPRKNRQFIADNFCMRGLSNFYPDLTKR
IRTSYQSLTELNDSPVPLELERCKSPTSDHVNGHCTSPTSQSCSSGKRLSSADVSKVNRW
GPGRPPFRKAQSAACMEISLPVTTEETRENSYNRSRSSSISSIDKDSKEAITALYFMESF
ARKNDSTVSPCLFVGTSLGMVILISLNLPSSDEQRFTEPVVVLPSGTFLSLKGAVLTFSC
MDRTGNLMQPPYEVWRDPNNTDENEKTWKRKLVMNYSSSSQEMGDHQYTIICSEKQAKVF
SLPSQTCLYVHNITETSFILQADVVVMCNSACLACFCANGHIMIMSLPSLRPMLDVNYLP
LTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQEMCDNIQDMLGDLFTPIETPEAQNRG
FLKGLFGGSGQTFDREELFGEASAGKASRSLAQHIPGPGSIEGMKGAAGGVMGELTRARI
ALDERGQRLGELEEKTAGMMTSAEAFSKHAHELMLKYKDKKWYQF
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgaagaagtttaatttccgaaaagttttggatggcttaactgcctcttcccccggcagt
ggtagcagcagcggcagtaatagtggtggggctggaagtggctccgtccatcctggaggg
actgcaggggttctgagagaggggatccaggaaagcctcatctccgagtgtttccagatt
tgcaagacagttcggcacggttttccctatcagcccacagcattggcctttgatccagtc
cagaaaatcctggctattggaacgagaacaggtgctatacgaatacttgggaggcctggt
gttgactgttactgccaacatgagagtggggcggctgtcttgcagctccaattcctgatc
aatgagggcgctttggtcagtgcgagttcagatgacacacttcatttgtggaatctgaga
cagaaaaggccggctattctccattctcttaagtttaacagagaacgaattacttactgt
catctacctttccagagtaaatggctctatgttggaacagaaagaggaaatacacatatt
gtaaatattgaatctttcattctttctggatatgtcatcatgtggaacaaggcaattgag
ctctccaccaagactcatccaggcccagttgtacatctaagtgatagcccaagagatgaa
ggaaaactgttaataggttatgaaaatggcactgtggtattctgggacttgaaatctaaa
agagcagaactgagagtttattatgatgaggctattcattcaattgattggcatcatgag
ggcaaacaattcatgtgcagccactcagatggtagcttgactttatggaacctgaaaagc
ccaagtcgccctttccaaaccacagttccacatggaaaaagtcaaagagaaggaagaaag
tctgaatcttgtaaacctattctgaaagtagagtacaaaacgtgcaggaacagtgaacca
tttataatattctctggtgggttgtcatatgacaaagcttgcagaagaccaagtttaacc
atcatgcatgggaaagcaattacagtacttgaaatggatcatcctattgttgaatttcta
actttatgtgaaacgccctatcccaatgagtttcaagaaccctatgctgttgcagtactt
ctagagaaagatctcatcgtagttgatctaacacaaaccaattttccaatctttgaaaat
ccatatccaatggacattcatgagtcaccagttacatgcacagcatattttgccgattgc
cctccagatttgattctagtactctattctataggagtcaagcataaaaaacaaggatac
agtaataaggaatggccagtaagtggaggagcttggaatcttggagcacaaacgtatcca
gaaattattattactggtcatgctgatggaacaataaaattttgggatgcttcagcaatg
acactgcagatgttgtacaagctaaaaacttcaaaagtatttgaaaagcagaaggtggga
gatggcaaacagacgtgtgagattgtagaagaagatccctttgctgttcagatgatttac
tggtgtccagagagcagaatattttgtgtatctggggtctctgcatatgtcataatttat
aaattcagcagacatgaaatcacagcagaaatagtgtcattagaggtacgacttcagtgc
gatgttgaagacattattactcctgagccagaaacaagtcctccatttccagatctctcc
tctcaacttccttcttcaaggagtctttctggaagcactaatactgtgtctagtgaaggc
gtgacgaaggacagcatcccatgcctcagtgttaaaacacggccagtgcgcatgccgccg
ggctatcaagcggatcttgttattcagttggtgtgggtagatggcgagccgcctcagcag
atcaccagcctcgctgtgagctcggcatacggaatagttgcatttggaaactgcacgggg
ttggttgtggtagatttcatccagaagacagtactgttaagcatggggaccattgacctc
tatagatcaagtgacctgtaccagcgacagccccggtctcctcgaaaaaacaggcagttc
attgcagacaacttttgcatgcgtgggctgtctaacttttatcctgatttaacgaaacgg
atccgtacttcctatcagagcttaacagagctgaatgatagtccagttcccttggaactt
gagcggtgcaagtctcccacttcagaccatgtaaatggacactgcacaagtccaacctct
cagagttgcagttctggaaaacgtctttccagtgctgatgtttcaaaagtaaatcgctgg
ggtcctggaagaccaccatttagaaaggcacagtcagctgcttgcatggagatatcttta
ccagttacaactgaagaaacccgagagaactcctataaccgctccaggagctctagcatc
tccagtattgacaaggattctaaagaagcaattacagctttgtacttcatggaatccttt
gcacggaaaaatgactctaccgtgtccccttgtctgtttgttggaactagtctgggaatg
gtaatactcatctccctaaatctaccatcatcagatgaacaaaggtttacagagccggtg
gtggtattgccaagtggtacattcctctcactgaaaggagctgtgctaacattttcctgc
atggacagaactggcaatttaatgcagcctccatatgaggtatggagggatcccaacaac
acagatgaaaatgaaaaaacctggaaaaggaaattggtcatgaactactcctcttcatcc
caagaaatgggagaccatcagtatacgataatctgctcagaaaaacaagccaaagtcttc
tcactgccgtcccagacctgcctttatgttcacaacatcacagagacgtcattcatattg
caagcagatgtggtggtcatgtgcaacagtgcctgcctggcctgcttttgtgcgaatggg
catatcatgataatgagcttacctagccttcgcccaatgttggatgttaattatttgcca
ctgacagacatgagaatagcacggacattttgttttactaatgaaggacaggcattatac
cttgtctccccaactgaaattcaacggttaacatatagccaagaaatgtgtgataatatt
caggacatgttaggcgatttgtttactccaatagagacaccagaagcccaaaatagaggc
tttctcaagggactgtttggtggaagtggacagacatttgacagagaagaactctttggg
gaagcctcagcaggaaaagcatctcgcagcctcgcacagcacattcctggaccgggcagc
atagaagggatgaagggcgctgctggcggggtgatgggagagctaacgcgagcccggatt
gcacttgatgagagagggcagcgcctgggtgagctggaggagaagactgcaggcatgatg
accagtgcagaagcattttccaagcacgcacacgagctaatgctgaaatataaggacaag
aaatggtaccagttctaa

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