Rattus norvegicus (rat): 288151
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Entry
288151 CDS
T01003
Symbol
Hoxd1
Name
(RefSeq) homeobox protein Hox-D1
KO
K09301
homeobox protein HoxA/B/D1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
288151 (Hoxd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
288151 (Hoxd1)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
288151 (Hoxd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
DUF7255
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
288151
NCBI-ProteinID:
NP_001099354
RGD:
1309179
Ensembl:
ENSRNOG00000001572
UniProt:
D4ACE4
LinkDB
All DBs
Position
3:80073041..80075180
Genome browser
AA seq
328 aa
AA seq
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MSSYLEYVSCAAGGGSGGVGGDVLGFAPKFCRADARPVALQPAFPLGSGDGAFVSCLPLA
AARPTPSPPVAPAQPPGPQPAASRYAPCTLEGAYERGAAPASAAEYGFLGSGPAFDFPGA
LGRAADDSGPHVHYATSAVFSSGGSFLLSGQVDFAAFAEPGPFPACLKEPADGHPGPFQT
VSPAPGACPKPASPTSGLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPSSAIRTNFSTKQ
LTELEKEFHFNKYLTRARRMEIANCLQLNDTQVKIWFQNRRMKQKKREREGLLATAASVA
SLQLPGSETSPIKSGRNLGSPSQAQEPS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctacctggagtacgtatcgtgcgctgcgggcggaggcagcggaggggtaggc
ggcgacgtgctgggcttcgcacccaagttctgccgcgccgacgcgcgcccagtggccctg
cagcccgccttccccctgggcagcggcgacggcgccttcgtgagctgcctgcccctggcc
gctgcccggcccacgccttcacctcccgtagcccccgcgcagcccccgggcccgcagccg
gccgcgtcccggtacgcgccctgtaccctggaaggcgcctacgaacggggcgccgcacct
gcctctgccgccgagtatggtttcttggggtccgggccggcattcgactttccgggcgcg
cttgggagagcagcggacgacagcggcccgcacgtccactatgccacctcggcggtcttt
tccagcggaggatcattcctgctcagcggccaggtggacttcgctgcctttgccgagcct
ggcccctttcccgcttgtctcaaggaacccgcagacggccaccccgggccctttcagact
gtgtccccggcccccggagcctgccccaagcccgcctcgcccacctccggcctcccggcc
gcccacagcactttcgagtggatgaaagtgaagaggaacgcccccaagaaaagcaaactg
tccgaatatggagccacaagcccctccagtgccatccgcacgaatttcagcaccaagcaa
ctgacagaactcgagaaagagtttcatttcaataagtacctaactagagcccgacgcatg
gagatagccaactgtttacagctgaatgacacccaggtcaaaatctggttccagaaccgg
aggatgaaacagaagaaaagggaacgagaggggcttctggccacagctgcctctgtggcc
tcgcttcaacttcccgggtcagaaacaagtcccatcaaatctggccggaatctaggaagc
ccttctcaggctcaagagccttcctga
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integrated database retrieval system
