Rattus norvegicus (rat): 288449
Help
Entry
288449 CDS
T01003
Symbol
Katnal1
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
288449 (Katnal1)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
288449 (Katnal1)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
288449 (Katnal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_16
TIP49
AAA_5
AAA_33
AAA_14
Mg_chelatase
AAA_22
NPHP3_N
AAA_28
AAA_7
IstB_IS21
TsaE
AAA_2
AAA_18
nSTAND3
AAA_24
RNA_helicase
ORC-CDC6-like
AAA_17
NACHT
Parvo_NS1
PhoH
CCDC22_CC
Zeta_toxin
AAA_25
SRPRB
Motif
Other DBs
NCBI-GeneID:
288449
NCBI-ProteinID:
NP_001006957
RGD:
1359252
Ensembl:
ENSRNOG00000047618
UniProt:
Q5XIK7
LinkDB
All DBs
Position
12:11130935..11192330
Genome browser
AA seq
488 aa
AA seq
DB search
MNLAEICENAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSLRDPATKAKWQQVRQELL
EEYEQVKSIVSTLESFKMDKPPDFPVSCRDEPFRDPAVWPPPVPAEHRAPPQIRRPNREV
RPLRKDMGAGARGLVGRAHQISKSDKAASRDKDYRARGRDDKARKNMQDGASDGEIPKFD
GAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWK
GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPT
TIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPW
DIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITN
ICRDASLMAMRRRINGLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYEK
WMVEFGSA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggccgagatttgtgagaatgcgaagaaaggccgggaatatgcacttctgggg
aattatgactcgtcaatggtgtattaccagggagtaatacagcagatccagagacactgc
cagtcactgagagacccggccaccaaagcgaagtggcagcaggttcggcaggagctcttg
gaagaatatgaacaagttaagagtatcgtcagcacgttagaaagctttaagatggacaag
ccccctgacttccctgtgtcttgtcgagacgaaccgtttagagatccggcagtatggcca
cccccggtccctgcagaacacagagcaccacctcaaatcaggcgtcccaaccgagaagtg
aggcctctgcggaaagacatgggggcaggagcccggggcctcgtgggccgagcacaccag
atatcgaagagtgataaagctgcaagtcgggacaaggactatagagcaagagggagagat
gacaaggcaaggaaaaatatgcaagatggcgcaagtgatggtgagatccccaagttcgat
ggcgctgggtatgacaaggatctggtggaggctctggagagggacattgtgtccaggaac
cctagcattcactgggatgatatagcagatctggaggaagctaagaagttgctccgggaa
gctgttgtccttcccatgtggatgcctgactttttcaaagggattagaaggccatggaag
ggtgtgctgatggtcggccctccagggactggtaagactatgctggctaaagctgttgcc
accgaatgtgggacaacctttttcaacgtctcctcttccaccctgacgtctaagtaccga
ggcgagtctgagaagttggtccgtctgttgtttgaaatggcgaggttctatgcccctacc
acgatcttcatcgacgaaatagactccatctgcagtcgaagagggacctccgatgagcat
gaggccagccgcagagtgaagtccgagctcctcatccagatggacggagttggaggagcc
ttagaaaacgatgatccatccaaaatggtgatggtcctggcggctacgaacttcccgtgg
gacatcgatgaggctctgcgcaggagactggagaagaggatctacatccctctccccaca
gcaaaaggaagggcggagctcctgaagatcagcctccgggaggtggagctggaccccgac
atccacctggaggacatcgctgagaagacggagggctactcgggcgctgacataactaac
atctgcagagatgcttctctgatggccatgaggcggcgcatcaacggcctgagtccagaa
gagatcagggccctgtccaaggaggagctgcagatgcctgtcaccagaggggacttggag
ctggcgctgaagaaaatcgccaagtctgtctctgcggcagacctggagaagtacgaaaag
tggatggttgagttcggatctgcgtga
DBGET
integrated database retrieval system
