Rattus norvegicus (rat): 288533
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Entry
288533 CDS
T01003
Symbol
Taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
288533 (Taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
288533 (Taf6)
03036 Chromosome and associated proteins [BR:
rno03036
]
288533 (Taf6)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
288533 (Taf6)
Coactivators
SAGA/TFTC/STAGA complex
288533 (Taf6)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
288533 (Taf6)
STAGA complex
288533 (Taf6)
TFTC complex
288533 (Taf6)
SAGA complex
288533 (Taf6)
SLIK complex
288533 (Taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
288533
NCBI-ProteinID:
NP_001037690
RGD:
1311608
Ensembl:
ENSRNOG00000001355
UniProt:
Q498R0
LinkDB
All DBs
Position
12:complement(22169570..22178031)
Genome browser
AA seq
647 aa
AA seq
DB search
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG
KGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDAYRGEFGSLGPLLCSHVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSSASSTQQGKAKEALLLILLQSHLHLLHHLHLGAVPSVGGSRKLGTAPLQLQGLQR
LMAPSLLDLALPSLLCDIVTCADLLSSADSYTHKQRVREEEERCFPQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaaactgaaactcagcaataccgtgttgccctccgagtctatgaag
gtggtggcagaatccatgggcattgctcagattcaggaggagacttgccagctactgaca
gatgaggtcagctaccgcatcaaggagattgcccaggatgctttgaagttcatgcacatg
gggaaacgacagaagctcactaccagtgacattgactatgcattgaaattaaagaatgtg
gagccactatatggcttccatgctcaggagttcatccctttccggtttgcctctggtggg
ggccgggagctgtacttctatgaagagaaggaagtggacctgagtgatatcatcaacacc
cctctgcctcgggtgcctctggatgtctgcctcaaagctcattggctgagcattgaaggc
tgccagccagctataccagagaatccacccccagctcccaaagagcagcagaaggccgag
gccacagaacccctgaagtcagcaaagccaggccaagaagaagatggacccttgaaaggc
aaaggtcaaggggcagctgcagctgatggcaaaggaaaagagaagaaggcacctcccttg
ctggaaggggcccctttccgcctgaagccccgcagcatccatgagctgtccgtggagcag
cagctgtactacaaggagatcacagaagcctgtgtgggatcctgtgaggccaagagagcg
gaagctctgcagagcattgccacagatcctggactctatcagatgttaccacggtttagt
accttcatctcagagggggtccgtgtgaatgtggttcagaataacctggccttgctcatc
tacttgatgcgaatggttaaggccctgatggacaaccccacactgtatcttgagaaatat
gtgcacgagctgattcctgcagtaatgacctgcattgtgagcagacagctgtgcctgcgg
ccagatgtggacaatcactgggcactccgggattttgctgcccgtctagtggcccagatc
tgtaagcatttcagcacaaccaccaacaacatccaatcccgaatcaccaagacctttacc
aagagctgggtggatgagaagactccatggacaactcgatatggctccattgcaggcctg
gcagagctggggcatgatgtgattaagaccctaattctgccaaggctgcagcaggaaggg
gagcggatccgaagtgtcttggacggacctgttctgagcaacatcgaccgtatcggagca
gaccatgttcagagccttctcctgaaacactgtgccccagtattggcgaagctgcgccct
ccacctgacaatcaggatgcctaccggggagaatttgggtcccttgggccccttctctgc
tcccatgtggtgaaggccagggcccaggccgctcttcaagctcagcaggtcaacaggacc
acactcaccatcacacagcctcggcccacactgaccctctcacaggcccctcagccaggc
cctcgtacccctggcttattgaaggtccctggctctattgccttgcctgtccagacactg
gtgtctgcaagagctgctgcccctcctcagccttctcctcctccaacgaagtttattgta
atgtcctcatcttccagtgcctcatcaacccagcaggggaaggcaaaggaggccctcctt
ctcatccttctccagtcccaccttcatcttcttcaccatctccacttgggggcagtgccc
tctgtggggggaagcaggaaactggggacagcccccctccagctccagggactccaaagg
ctaatggctcccagcctactggacctagctctccccagcctgctctgtgatattgtcaca
tgtgctgacctcctctcttctgcagattcctacacacacaaacaacgtgtgagggaggaa
gaagaaagatgttttccccagtga
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