Rattus norvegicus (rat): 288596
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Entry
288596 CDS
T01003
Symbol
Trim50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50 isoform 1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
288596 (Trim50)
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
288596 (Trim50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
U-box
zf-RING_4
Sina_RING
zf-Nse
zf-RING_6
Prok-RING_4
Baculo_IE-1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
288596
NCBI-ProteinID:
NP_851594
RGD:
631346
Ensembl:
ENSRNOG00000022483
UniProt:
Q810I1
LinkDB
All DBs
Position
12:complement(26937349..26954286)
Genome browser
AA seq
483 aa
AA seq
DB search
MAWQLTVPELQDQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSV
DCSSSPPNVSLARVIDALRLPGDTEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQHH
RVTPVSTVYSRMKEELAGRLSELKEQHRDVEEHIGKLVNNRTRIINESDVFSWVIRREFQ
ELHHLVDEEKARCLEGVESHTRGLVASLDMQLEQAQGTQERLAQAERVLEQFGNESHHEF
IRFHSITSRGEVQQARPLEGVFSPISFKPALHQADIKLTVWKRLFRKVLPAPESLKLDPA
TAHPLLELSKGNTVVHCGLLAQRRASQPERFDYSTCVLASKGFSWGRHYWEVVVGSKSDW
RLGVIKGTASRKGKLSKSPEHGVWLIGLKEGRLYEAFGCPRLPLPVAGHPHRIGVYLHYE
QGELTFFDADRPDDLRALYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSAPGHLTR
AQV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcttggcagctgactgtgccggaactccaggaccagctgcagtgtcccatttgcctg
gaggtcttcaaagagcctctgatgcttcagtgtggccactcctactgcaagaactgcctg
gatagcttgtctgaacacctggattccgagctgcgctgtcctgtgtgtcgtcagtcagtt
gactgcagcagctccccgcctaatgtctccctggcccgggtgatcgatgctctgaggctc
ccgggggacacagagcccaccgtctgcgtgcaccaccgaaaccctctcagcctcttttgt
gagaaagaccaggaattcatctgtggtctctgtggcctgctgggctcccaccaacaccac
agagtcacaccagtctccacggtctacagccgcatgaaggaagagcttgcaggccgcctg
tctgagctgaaggagcagcacagggacgtggaggagcacattggcaaactggtcaacaac
aggacccggattattaatgagtctgacgtcttcagctgggtgatccgaagagagttccag
gagttgcaccacctggtggatgaagagaaagcccgctgcctggagggggtggagagccac
acgcgtggcctggtggcctccctggacatgcagctggagcaggctcagggtactcaagag
cgactggcccaagccgagcgggtgctggagcagtttggcaatgagagtcaccatgagttc
atccggtttcactccataacctccaggggagaggtccagcaggctcggcctttggaaggc
gtcttcagccccatctccttcaagcccgctctccaccaagctgacatcaaactgaccgtg
tggaagaggctattccggaaagttctgccagctccagaatctctcaagctggacccggct
actgcccaccctctcctggagctctcgaagggcaacacagtggtgcactgtggcctcctg
gcccagagacgcgccagccaacctgagcgctttgactacagcacctgtgtcctggctagc
aagggcttctcctggggtcgccactactgggaagtggtggtggggagcaagagtgactgg
cgcttgggggtcatcaagggcaccgccagccgcaaaggcaagctgagcaagtccccagaa
catggggtatggctaataggcctgaaagagggtcggctgtatgaggcttttggctgccca
cggctgccactgcccgtggctggccaccctcatcgcattggcgtctacctacactatgag
cagggtgagctcacgttctttgatgctgaccgtcctgatgatcttcgggcactctacact
ttccaggctgacttccagggcaagctgtaccctatcctggacacatgctggcatgagagg
ggcagcaactcactgcccatggtactgcccccacccagtgcgcctggccacctcacacgt
gcacaggtatag
DBGET
integrated database retrieval system
