Rattus norvegicus (rat): 288663 Help Entry 288663            CDS       T01003                                  Symbol Atxn2 Name (RefSeq) ataxin-2   KO K23625   ataxin 2/2L Organism rno  Rattus norvegicus (rat) Pathway rno05014   Amyotrophic lateral sclerosis rno05017   Spinocerebellar ataxia rno05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:rno00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     288663 (Atxn2)    05017 Spinocerebellar ataxia     288663 (Atxn2)    05022 Pathways of neurodegeneration - multiple diseases     288663 (Atxn2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rno03019]     288663 (Atxn2) Messenger RNA biogenesis [BR:rno03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      288663 (Atxn2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SM-ATX LsmAD PAM2 LSM Motif Other DBs NCBI-GeneID:  288663 NCBI-ProteinID:  NP_001406666 RGD:  1306637 Ensembl:  ENSRNOG00000001256 LinkDB All DBs Position 12:complement(40413657..40509895) Genome browser AA seq 1136 aa AA seqDB search MSLKPQPQPPAPASGRKPGGGLLSSPGAAPASAASTSSSVVPAPAAPVASSSAVAGGGRP GLGRGRNSSKGLPQPTISFDGIYANVRMVHILTSVVGSKCEVQVKNGGVYEGVFKTYSPK CDLVLDAAHEKSTESSSGPKREEIMESVLFKCSDFVVVQFKDTDSSYARRDAFTDSALSA KVNGEHKEKDLEPWDAGELTASEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLS SYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNCSD REGHGTNTRENKYIPPGQRNREVISWGSGRQSSPRMGQPGPGSMPSRATSHTSDFNPNAG SDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPS AHGSPAPVSTMPKRMSAEGPPRMSPKAQRHPRNHRVSAGRGSMSSGLEFVSHNPPSEAAA PPVARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSAGNSPSGPVLASPQAGITPAEAV SMPVPAASPTPASPASNRALTPSIEAKDSRLQDQRQNSPAGNKENIKASETSPSFSKAEN KGVSPVISEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLSKNREGEKSRDLMKDKTEASA KDSFIDSGSSSCTSSSSKTNSPSASPSVLSNAEHKRGPEVTSQGVQTSSPACKQEKDDRE ERKDTTEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPAPVYTQ PVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQEQHHQSTMMH PASAAGPPIVATPPAAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMM APPAHAQPGLVSSSAAQFGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPN ATLHPHPPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAG LAPTPPSMTPASNTQSPQSSFPAAPQTVFTIHPSHVQPAYTTPPHMAHVPQAHVQSGMVP SHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL NT seq 3411 nt NT seq  +upstreamnt  +downstreamnt atgtcgctgaagccgcagccgcagccgcccgcgcccgccagtggccgcaagcccggcggc ggcctgctctcgtcgcccggcgccgcgccggcctcggccgcgtcgacctcgtcttccgtg gtgccggcccctgccgcgccggtggcgtcttcctcggcggtcgcgggcggcgggcgtccc ggcctgggcagaggtcggaacagtagcaaaggactgcctcagcctacgatttcttttgac ggaatctatgcaaacgtgaggatggttcatatacttacatcggttgtgggatcgaaatgt gaagtacaagtgaaaaacggaggtgtatatgaaggagtttttaaaacatacagtcctaag tgtgatttggtacttgatgctgcacatgagaaaagtacagaatccagttcggggccaaaa cgtgaagaaataatggagagtgttttgttcaaatgctcagacttcgttgtggtacaattt aaagatacagactcgagttatgcacgaagagatgctttcactgactctgctctcagtgct aaagtgaatggtgaacacaaggagaaggacctggagccctgggatgcaggggagctcaca gccagcgaggagctggaggctctggagaatgatgtgtctaacggatgggatcccaatgat atgtttcgatataatgaagagaattacggtgtggtgtccacatacgatagtagtttatct tcatatacggttcccttagaaagggacaactcagaagaatttctaaaacgggaggcaagg gcaaaccagttagcagaagaaatcgagtccagtgctcagtacaaagctcgtgtggccctt gagaatgatgaccggagtgaggaagagaagtacacagcagtccagagaaactgcagtgac cgggaaggtcatggcaccaacactagggaaaataaatatattcctcctggacaaagaaac agagaagtcatatcctggggaagtgggagacagagctcaccacggatgggccagcctgga ccaggctccatgccatcaagagctacttctcacacttcagatttcaacccgaatgctggc tcagaccaaagagtagttaatggaggtgttccctggccatcgccttgcccatctccttcc tctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacc cctacacggccgccctccaggcccccctcgaggccctccagacccccgtctcacccctct gctcatggttctccagctcctgtctctactatgcctaaacgcatgtctgcagaaggccca ccaaggatgtctccaaaggcacagcggcaccctcggaatcatagagtctccgctgggaga ggctccatgtctagtggcctagaatttgtatcccacaatcccccaagtgaagcagctgct cctccagtggcaaggaccagtcctgcagggggaacgtggtcctcagtggtcagtggggtt ccaagactatctcccaaaactcacagacccaggtctcccaggcagaacagcgctggaaac tctcccagcgggcctgtgctcgcttctccccaagctggcatcacccctgccgaagccgtt tccatgccggtccccgccgcgtcccctactcctgccagccctgcgtccaacagagctctg accccatctatcgaggcgaaagattccaggcttcaagatcagaggcagaactctcctgca gggaataaagaaaatattaaagcaagtgaaacatcacctagcttttcaaaagctgaaaac aaaggtgtgtcaccagttatctctgaacacagaaaacagatcgatgatttaaagaagttt aagaatgattttaggttacagccaagttctacgtctgaatctatggatcaactactaagc aaaaacagagaaggagaaaagtcacgagatttgatgaaagacaaaacggaagcaagtgct aaggacagcttcattgacagtggcagcagcagctgcaccagcagcagcagcaagaccaac agccccagcgcctccccttctgtgcttagtaatgcagagcacaagagggggcctgaggtc acgtcccagggggtgcagacttccagtccggcctgcaaacaagagaaggatgaccgagaa gagcggaaagacacaaccgagcaagttaggaagtcgactttgaatcccaatgcaaaggag ttcaaccctcgttctttctctcagccaaagccttctactaccccaacgtcgcctcggcct caagcccagcccagcccgtccatggtgggtcatcagcagccagctccagtgtacacgcag cctgtgtgctttgcacccaatatgatgtaccctgtcccagtgagcccaggcgtgcagcct ttatacccaatacctatgacgcccatgccagtgaaccaagccaagacatatagagcaggt aaagtaccaaatatgccccaacagcgacaagagcagcaccatcaaagcaccatgatgcac cctgcctccgcagcagggccgcctatcgttgccaccccgcccgccgcttactccacgcag tacgttgcctacagccctcagcagtttcccaaccagcctttggtccagcacgtgccgcat tatcagtctcagcatcctcatgtgtacagtcctgtcatacaaggtaatgccaggatgatg gcaccaccagcacatgctcagcctggtttagtgtcgtcttcagctgctcagttcggggct cacgagcagacgcatgccatgtatgcatgtcccaaattaccatacaacaaggagacaagc ccttctttctactttgccatttccaccggctccctcgctcagcagtacgcacatcctaat gccaccctgcatccacaccctccacatcctcagccttcggccactcccaccggacagcaa caaagccagcatggtggaagtcatcctgcacccagtcctgttcagcaccatcagcaccag gccgcccaggctcttcacctggccagtccacagcagcagtcggccatttatcacgcgggg ctggcaccaacaccaccttccatgacacctgcctctaatacacagtctccacagagcagt ttcccagcagcaccacagacagtcttcaccatccatccttctcatgttcagccggcatac accaccccaccccacatggcccacgtacctcaggctcatgtacagtcaggaatggttcct tctcatccaactgcccatgcgccaatgatgcttatgacgacacagccacccggcggtccc caggccgccctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcatttc ccctatatgacgcacccttcagtacaagcccaccaccaacagcagttgtaa

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