Rattus norvegicus (rat): 288665
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Entry
288665 CDS
T01003
Symbol
Cux2
Name
(RefSeq) homeobox protein cut-like 2 isoform 1
KO
K09313
homeobox protein cut-like
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
288665 (Cux2)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
288665 (Cux2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
DUF4407
MLTR_LBD
DUF4618
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
288665
NCBI-ProteinID:
NP_001258309
RGD:
1305967
Ensembl:
ENSRNOG00000001259
UniProt:
F1M048
LinkDB
All DBs
Position
12:40168402..40368303
Genome browser
AA seq
1426 aa
AA seq
DB search
MVAPVLKSFQAEVVALSKRSQEAEAAFLSVYKQLIEAPDPVPSVEVARTLDDRLQRPSFH
PSGQRLRDVHISWKRCPEPPSAREQNEGTCPTGHTPANGNHLPGPEDTLVTDTLLQKDEA
ERQKGLQEVHVTLAARLGEAEEKIKVLHSALKATQTELLELRRKYDEEAASKADEVGLIM
TNLEKANQRAEAAQREVESLREQLASVNSSIRLACCSPQGPGGEKVSFALCSGPRLEAAL
ASKDREILRLLKDAQQLRHSLQELEEVSANQIADLERQLAAKSEAIEKLQEKLEAQADYE
EIKTELSILRAMKLASSTCSLPQALGKPDDPLLMAKDAFFPTQKLLLEKPALLASPEEDP
SEDDSIKGSLGMEPSYPPQLPPPPGPEDPLSPSPTQPLLGPSLGPDGPRTFSLSPFPSLA
PGERLAGDPLLSKHMMAPVAFKGETGNLLAFPPAFYGGAKPPTAPAAPVPGPEPSGAPEP
VDGAGPEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLT
VKGKEPFIKMKQFLSDEQNVLALRTIQVRQRGSITPRIRTPETGSDDAIKSILEQAKKEI
ESQKGGESKNSPASVSIPNGTASSSTSEDAIKNILEQARREMQAQQQALLEMESGPRGRS
VPPSPPERPSPATMSQNGALACVKQEDGGCSSSSSGSAQAPLAVLSPAAFVQRIIRKVKS
EIGDAGYFDHHWASDRGLLSRPYASVSPSLSSSSSYSGQPNGRAWPRGDEATIAPEDEAA
TGMGEDEAPRVGELKAEAGVSEVGGGRLPYYPAYVPRTLKPTVPPLTPEQYELYMYREVD
TLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQL
WLSDQLGQGQAPNQQPSASQASPTEPTSSPSPPPSPTEPEKTSQEPLGLSLESSKENQQP
EGRASSTLGGKPLSSSQTTGGIQEMVAMSPELDTYSITKRVKEVLTDNNLGQRLFGESIL
GLTQGSVSDLLSRPKPWHKLSLKGREPFVRMRLWLSDPHNVEKLRDVKKLEKKAYLKRRY
GLISTGSDSESPAAHSECPSPCLQPQELSLMQAKKPRVVLAPAEKEALRKAYQLEPYPSQ
QTIELLSFQLNLKTNTVVNWFHNYRSRMRREMLVEGTQDDPDFDPSGGSSVLPSGHTHTD
PTPQSPDSEIEDQKPPMKSLELQEPESPVHQAAPDRAVVKIKQEEGLEVDGDSQPQDIGD
PDRGQGGPKEEDTHPLGNNELSELVPGPFLPGTPNPDCSSLHTPQAKETGEQVHSEPLSF
KSTSESSCCSLEGPPNSPSAISSPDLMTCVSPAPSSSAPISPSLPGTLPAKVPSTSPTAD
PAAALHPSTKVNPNLQRRHEKMANLNSIIYRLERAANREEALEWEF
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggtagccccagtgctgaaaagcttccaagctgaggtggtggctctcagtaagagaagt
caggaggcagaggcagcattcctgagtgtttataagcaattaattgaagcgccagaccct
gtcccgtcggttgaggtggcgcggactctagacgacagactgcagcgtcccagcttccac
cccagtgggcagcgcctacgagacgtgcacatctcgtggaagaggtgcccagagccaccc
agtgccagagagcagaacgaggggacgtgtcccaccgggcacacgccagccaacggtaac
cacctgccaggtcccgaggacaccctcgtgacagacaccttgctgcagaaggatgaggcc
gagagacagaagggcctccaagaagtccacgtcaccttggcagccaggctgggggaggca
gaggagaaaatcaaggtgttacattcagcgctaaaggccacacagacggagctgctggag
ctgaggaggaaatacgatgaggaggctgcatccaaggccgatgaggtcggcttgatcatg
acgaacctggagaaggccaaccagcgagcagaggctgcccagcgggaggtagaaagcctc
cgggagcagctggcatcggtcaacagctccattcgcctggcttgctgctccccgcaggga
cccggtggggagaaggtgagcttcgccctgtgctcagggccccggctggaggcagcgctg
gcttccaaggacagggagatcctcaggctgctgaaggacgcccagcagctgcggcactct
ctgcaggagctggaagaggtctcagccaaccaaatcgctgatctggagcggcagctagcg
gccaagtctgaggccatagagaaactccaagaaaagctggaggcccaggctgactatgaa
gagattaaaacagagctgagcatcctgagagccatgaagctggcctccagcacgtgcagc
ctcccacaggcgctgggcaagcctgacgacccactgctcatggccaaggatgccttcttc
cccacacagaagctcctgctggaaaagcccgcgctgctggccagccctgaggaggacccc
tcggaggatgactctatcaagggctcactgggcatggagccctcctaccctcctcagctt
ccacctccgccaggccctgaagacccgctgtccccaagccctacgcagcccctgctgggc
cccagcctgggtcctgatggaccaaggactttctcgctgtcccccttccccagcctggca
ccgggggagaggctggctggggacccactgctgtccaaacatatgatggccccagttgcc
ttcaaaggggaaacgggcaacctgctggcattcccaccggccttctatggcggtgccaag
cctccaacggctcctgccgccccagtgcccggccctgagccctctggggccccagagcct
gtggacggggctgggccagaggaggagcagctggacacggccgagatcgccttccaggtg
aaggagcagcttctgaagcacaacattggccagcgtgtgtttggccactatgtgctggga
ctgtcgcagggctcggtgagtgagatcctggcacggcccaagccgtggcgcaagctcacg
gtgaagggcaaggagcccttcatcaagatgaagcagttcctgtcggatgagcagaacgtg
ctggccctgcgcaccatccaggtgaggcagcgaggcagcatcaccccgagaatccgaact
cctgagaccggctcagacgacgccatcaagagtatcctggagcaggccaagaaggagatt
gagtctcagaaagggggtgagtccaagaactcccctgcctccgtgagcatccccaacggc
acagcttcctccagcacctcggaagacgccatcaagaacattctggaacaagcccgccgc
gaaatgcaagcccagcagcaggccctgctggagatggagtcgggtcccaggggccgctca
gtgcctccctctcctccggagcggccctcgccagccactatgagccagaatggggccctg
gcctgcgtgaagcaggaagacggcggctgcagcagcagcagtagcggcagtgcgcaggcg
ccgcttgctgtcctgtcccccgctgcatttgtgcagcggatcatccgcaaggtgaagtca
gagatcggcgacgctggctactttgatcaccactgggcatcagaccgtggtctgctcagc
cgtccctacgcctccgtgtcaccttccctctcctcctcctccagctactcgggacagccc
aatgggcgagcctggccccgtggggacgaggcaaccattgcccctgaggacgaagcggct
acgggcatgggggaggacgaggcccccagggtgggagagctcaaggccgaggccggagtc
tccgaggtgggtggcgggcgactgccctactacccagcgtatgtgccccgcacactcaag
cccactgtgccgcccctaacacccgagcaatacgagctatacatgtaccgggaggtagac
actctggagctcacccgccaggtcaaggagaagctagccaagaacggcatctgccagcgc
atctttggggagaaggtcctgggactgtctcagggcagcgtgagtgacatgctgtcacgg
ccaaagccatggagcaagctgacacagaagggccgggagcctttcatccgcatgcagttg
tggctatcagaccagctgggccagggccaggccccaaaccagcagcccagcgctagccag
gccagccccacggagccaacgtcctcaccatcacctcccccaagccccacggagcctgaa
aagacttcccaggagcctctgggcctgtccctagaaagcagcaaggagaatcagcaacca
gagggccgggccagctccaccctgggtgggaagcccctctcaagcagccagactacgggg
ggcatccaggagatggtggccatgtccccagagctggacacatactccatcaccaagaga
gtcaaggaggtcctcacggacaacaacctagggcagcggttgtttggtgagagcatcctg
gggctaacacagggctccgtgtcagacctgctgtcgaggcccaagccctggcacaagctg
agcttgaagggccgggagccctttgtgcgcatgcggctgtggctgagcgacccccacaat
gtggaaaagcttcgagatgtgaagaagctggagaagaaagcctatctgaaacgccgatac
gggctcatcagcacgggctctgacagcgagtcaccggcagctcactccgagtgtcccagc
ccatgtctgcagccgcaggagttgagcctcatgcaggccaagaagccacgtgtggtgctg
gcaccggccgagaaggaggctctgcggaaggcctaccagctagagccctacccctcacag
cagaccatagagttgctctctttccagctcaacctcaagacaaacactgtcgtcaactgg
ttccacaactacaggtccaggatgcgccgggagatgctggtggagggaacacaggatgac
ccagactttgacccaagtgggggctccagtgtcctgccatcaggccacacccacacagac
cccaccccgcagagccctgactcagagattgaggaccaaaagccccccatgaagagcctg
gagctgcaggaacctgagagtcccgtacaccaagcagccccagacagggctgtggtgaag
attaagcaggaagagggtttagaggtggatggggacagccagccccaggacataggggat
ccagacagagggcaaggtggccccaaagaggaggatactcaccctctggggaacaatgaa
ctctcagagctggtccccgggcctttccttccaggcacacccaatccagactgctcttca
ttgcacaccccccaagcaaaagagactggggaacaggttcactcagagcctctgagtttc
aagtccacctctgaatcctcatgctgcagcctggaggggccaccgaactctccctctgcc
atctcctcgccagacctcatgacatgtgtgtcacccgccccttcctcctcagcccccatc
tccccatccctacctggcaccctacctgccaaagtgccgagtaccagtcccactgctgac
ccagctgcagccttgcaccccagcactaaggtgaaccccaacttgcagcggcggcatgag
aaaatggccaacttgaacagtataatctaccgactggagagggctgccaaccgggaagag
gctctggagtgggaattctga
DBGET
integrated database retrieval system
