Rattus norvegicus (rat): 288718
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Entry
288718 CDS
T01003
Symbol
Tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
288718 (Tfip11)
Spliceosome [BR:
rno03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
288718 (Tfip11)
Other components
Complex C specific factors
288718 (Tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
288718
NCBI-ProteinID:
NP_001008292
RGD:
1311449
Ensembl:
ENSRNOG00000000663
UniProt:
Q5U2Y6
A6J264
LinkDB
All DBs
Position
12:complement(49960025..49972257)
Genome browser
AA seq
837 aa
AA seq
DB search
MSLSHLYRDGEGHLDDDDDERENFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDSD
EERPSFGGKRARDYSAPVNFISAGLKKGAAEEADSEDSDAEEKPVKQEDFPKDLGPKKLK
TGGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIE
AKQRKGKGAVGAYGSERTTQSLQDFPVADSEEEAEEEFQKELSQWRKDPSGSKKKPKYSY
KTVEELKAKGRVSKKLTAPQKELSQVKVIDMTGREQKVYYSYSQISHKHSVPDEGVPLLA
QLPPTAGKEAKVPGFALPELEHNLQLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTA
EVLAHEERVISNLSKVLALVEECEHRMQPHGADPLTLDECARIFETLQDKYYEEYRLADR
ADLAVAIVYPLVKDYFKDWHPLEDSNYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRL
MWEVWMPFVRNVVAQWQPRNCEPMVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWN
PLTDTVPIHSWIHPWLPLMQARLEPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLT
PGSWEAFMLRNIVPKLGMCLGELVINPHQQHMDAFYWVMDWEGMISVSSLVGLLEKHFFP
KWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVG
AYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIETK
AEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtcccacttgtaccgggatggggaaggccaccttgatgatgacgatgacgag
cgtgagaactttgagatcactgactgggatctccagaatgagttcaaccccaaccggcag
cgtcattggcagaccaaagaggaggccacctatggagtgtgggctgagcgtgactcagac
gaggagaggcccagcttcggaggcaaacgggcccgagactattctgcacccgtcaacttc
atcagtgcggggctcaagaaaggggcggctgaggaggctgactcggaggactctgatgcc
gaagagaagcctgtgaaacaggaagactttcccaaggacttaggaccaaagaagttaaaa
acgggtggcaattttaagcccagccagaaaggctttgctggaggaaccaagtcgttcatg
gactttggcagctgggagagacacacgaaagggatcgggcagaagctgctgcagaagatg
ggctacgtccctgggcggggcctggggaagaacgcccagggtatcatcaaccccattgaa
gccaagcagaggaaaggcaagggagctgtgggggcctacggctcggagaggaccactcag
tctctgcaggacttccctgtggccgactccgaagaggaggcagaagaggagtttcagaag
gagctgagccagtggagaaaagaccccagcgggagcaagaagaagccaaagtattcttac
aagactgtggaggagctgaaagccaaaggcagggtcagcaagaagctcacagcacctcag
aaggagctctctcaggtcaaggtgatcgacatgacaggccgggagcagaaggtgtactac
agctacagccagatcagccacaagcacagtgtgcccgatgaaggggtgccgttgctcgcg
cagctgcctcccacagctggcaaggaagccaaggtgccgggcttcgcgctgcctgagctg
gagcataacctgcagctgctcattgagcgtacggagcaggagatcatccagagcgaccgg
cagctgcagtacgagcgggacatggtggtcagcctgtcgcacgagctcgagaagacagcc
gaggtgcttgctcacgaggagcgggtcatctccaacctcagcaaggtgctggccctggtg
gaggaatgtgagcaccgcatgcagccccatggcgctgacccgctcacgctggatgagtgt
gcccgcatctttgagacactgcaggacaagtactacgaggaataccgcctggcggaccgc
gcagacctcgctgtggccatcgtctacccgcttgtgaaggactacttcaaggattggcac
ccccttgaggacagcaactacggcacccagatcatctccaagtggaagagcctcctggag
aacgaccagttgctgtctcacagcagccaggacctgtcctcagatgccttccacaggctc
atgtgggaggtctggatgccttttgttcggaatgttgtcgcccagtggcaacccaggaac
tgtgagcccatggtggacttcctggacagctgggcacacatcatccctgtgtggatcctg
gacaatatcctggaccagctcatcttccctaagctgcagaaggaggtggacaactggaac
cccctgacagacaccgtcccgatccactcatggatccacccgtggctgccactcatgcag
gcccgcctggagccgctctactcccctgtccgcagcaagctgtctagtgcactgcagaaa
tggcaccccagcgatgcctcagccaagctcatcctgcagccctggaaagaggtcctcacc
cctgggtcctgggaggccttcatgctcaggaacatcgtgcccaagctgggcatgtgcctg
ggtgagctcgtcatcaacccccaccagcagcacatggacgccttttactgggtgatggac
tgggagggcatgatctccgtctccagcttggtgggattgctggagaagcacttcttcccc
aagtggcttcaggtgctgtgctcctggctcagtaatagccccaattacgaggagatcacc
aagtggtacctgggctggaagtccatgttctcagaccaggtgctggcacacccttctgtc
aaggacaagttcaacgaagcgctcgacatcatgaacagggctgtgtcctctaatgttggt
gcctacatgcagccaggtgcgagggagaacattgcctacctcacccacacggagcgcagg
aaggacttccagtacgaggccatgcaggagcgccgggaggctgagaacatggcacagagg
ggcattggtgtggctgccagctctgtgcccatgaactttaaggacctcattgagaccaag
gcggaggagcacaacatcgtgttcatgcctgtcattggcaagcggcacgagggcaagcag
ctctacacctttggccgcattgtcatctacattgaccggggtgtggtgtttgtgcagggc
gagaagacgtgggtgcccacctccctgcagagcctcatcgacatggccaagtag
DBGET
integrated database retrieval system
