Rattus norvegicus (rat): 288743
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Entry
288743 CDS
T01003
Symbol
Sgsm1
Name
(RefSeq) small G protein signaling modulator 1
KO
K21847
small G protein signaling modulator 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
288743 (Sgsm1)
Membrane trafficking [BR:
rno04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
288743 (Sgsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_RBD
RUN
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
288743
NCBI-ProteinID:
NP_001099407
RGD:
1308178
Ensembl:
ENSRNOG00000000708
LinkDB
All DBs
Position
12:48969578..49049110
Genome browser
AA seq
1093 aa
AA seq
DB search
MASVPAEAETRQRLLRTVKKEVKQIMEEAVTRKFVHEDSSHIISFCAAVEACVLHGLRRR
AAGFLRSNKIAALFMKVGKGFPPAEELSRKVQELEQLIESARNQIQGLQENVRKLPKLPN
LSPLAIKHLWIRTALFERVLDKIVHYLVENSSKYYEKEALLMDPVDGPILASLLVGPCAL
EYTKMKTADHFWTDPSADELVQRHRIHSSHLRQDSPTKRPALCIQKRHSSGSMDDRPSIS
ARDYVESLHQNSRATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGS
VGDLDYEKSVYWDYAVTIRLEEIVYLHCHQQVDSGGTVVLVSQDGIQRPPFRFPKGGHLL
QFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQGSSESTSSDKEDDEATDYVFR
IIYPGTQSEFVPQDLMDVSMNNLPSLWQPSPRKSSCSSCSQSGSADGSSTNGCNHERAPL
KLLCDNMKYQILSRAFYGWLAYCRHLSTVRTHLSALVNHMIVSPDLPCDAGQGLTASIWE
QYIQDSTTYPEQELLRLIYYGGVQPEIRRAVWPFLLGHYQFGMTEMERKEVDEQIHACYA
QTMSEWLGCEAIVRQRERESHAAALAKCSSGASLDSHLHRMLHRDSTISNESSQSCSSGR
QNLRLQSDSSSSTQVFESVDEVEQTEAEGRSEEKHPKIPNGNPANGTCSPDSGHPSSHNF
SSGLSEHSEPSLSTEDSVLDVQRSLPAVFRPGDSSVEDGQSSEATTSRDEAPREELAVQD
SLESDLLANESLEEFMSIPGSLDVALPEKDGAMMDGWPGEADKHGRADSEDNLSEEPEME
SLFPALASLAVTSSANNETSPVSSSGVTYSPELLDLYTVNLHRIEKDVQRCDRSYWYFTA
ANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNFPH
GGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDFKRELVYDDVFSVWE
TIWAAKHVSSAHYVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNAKQILQLAR
DLVHKVQILIENK
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggtccctgcggaggccgagacccgccagaggctgctgcgcaccgtgaagaag
gaggtgaagcagatcatggaggaggctgttacccgaaagttcgtccatgaggacagcagc
cacatcatctccttctgcgcggccgtggaggcctgcgtgctgcatggactgcggcggagg
gcggccggcttcctgcgaagcaacaagatcgcggcgctcttcatgaaggtgggcaagggc
ttccctccggccgaggagctgagccgcaaggtccaggagctggagcaactcattgagagc
gcgcgaaaccagatccagggcctgcaagagaacgtgcggaagctgccgaagctacccaac
ctgtccccgctggccatcaagcacctgtggatccgcaccgccctgttcgagagggtcctg
gacaaaatcgtccactacctggtagaaaacagcagtaaatattacgagaaggaggcgctc
ctgatggacccggtggacggacccatccttgcatctttgttggtggggccgtgtgcccta
gagtataccaagatgaagactgcagaccacttctggactgacccctcagccgacgagctg
gtccagagacaccggatccacagttcgcatctgagacaggattcacccaccaagcggccg
gcgctctgtatccagaagaggcattccagcggcagcatggacgaccgaccatccatatct
gcccgggactatgtagaatctctgcaccagaactccagggccaccctgctctacggaaag
aacaatgttctggttcagccaagggatgacatggaagccgtgccaggatacctgtctctg
caccagacagctgatgtcatgaccttgaagtggacacccaatcagctgatgaacgggtct
gtgggggacctggactacgagaagagtgtctactgggactacgctgtgaccatccgctta
gaggagatagtttacctgcactgccaccaacaagtggacagcggcgggaccgtcgtgctg
gtgagccaagatggaatccagaggccgcccttccgcttccccaagggcgggcacctgcta
caattcctctcctgtctggagaatgggctgcttccgcatgggcagctggacccgccgctt
tggtcacagcgaggaaaggggaaggtgtttcctaagttgcgcaagcggagtccacagggg
tcctctgagtccacgtcttcagacaaagaggatgatgaagccacagattacgttttccgc
atcatctaccccggcacccagtctgagttcgtgccccaggacctaatggacgtctctatg
aacaaccttccatccctatggcaacccagtcctcggaagtcctcctgctcttcctgttca
caaagcggctcagctgacggcagctcaaccaatggctgtaaccacgagagggctccactg
aaactgctctgtgataacatgaagtaccagatcctctccagagccttctatggatggctc
gcctactgcagacacctgtccaccgtgaggacccacctgtcagccctggtcaatcacatg
atcgtgtctccagacctgccctgtgacgctgggcaagggttgacggccagcatctgggag
cagtacatccaggacagcacgacttacccggagcaggagctgctgcggctcatctactat
ggaggtgtccagcctgagatccgcagggcagtgtggcccttcctcctgggccactaccag
tttgggatgacagagatggagaggaaagaggtggacgagcagatccacgcctgctacgca
caaaccatgtcggagtggctgggctgtgaagccatcgtgagacagagggagcgggagtcc
cacgcggctgccctggccaagtgctcttccggagccagcctggacagccaccttcaccgg
atgctgcaccgggactctaccatcagcaatgagtcctcccagagctgcagctcaggccgc
cagaacctccgactgcagagcgattccagcagcagcacacaggtatttgagtcagtggat
gaggtggaacagacagaggcagaaggcaggtcagaagaaaaacaccccaagatccccaat
gggaacccagcaaacggcacttgctccccagactccggacacccttcctcccacaacttc
tcctccggcctctcagagcactcagagcccagtcttagcaccgaagacagtgtcttggat
gtccagcgcagcctccccgctgtgtttcggcctggggacagcagtgtggaagacggacag
agcagcgaggccaccacttcccgggacgaggccccccgggaggagctggcagtacaagac
agtcttgagagtgacctccttgccaacgagagcttggaggagttcatgtccatccctggc
agcctggacgtggccctgcccgagaaggatggcgccatgatggacggctggcctggcgag
gcagacaagcacggtcgggctgacagcgaggacaacctctcagaggagccagagatggag
agtctgttccctgccctggcttctctggctgtgacctcctctgccaacaacgagacgtcc
cctgtgtcctccagtggcgtcacctactctccagagctactggacctgtacacggtgaac
ctgcaccgcatcgagaaagacgtgcagaggtgcgaccgcagctactggtacttcacagcc
gccaacctggagaagctgaggaacatcatgtgcagctacatctggcagcacatcgagatt
ggctatgtccagggcatgtgtgacctcttggctccgctgttggtcatcctggatgacgag
gccctagccttcagttgcttcacagaactcatgaagaggatgaaccaaaacttcccccat
ggaggcgccatggacacacacttcgccaacatgaggtctctgatccagatcctggactct
gagctcttcgagctgatgcatcagaacggcgactacacccacttctacttctgctatcgc
tggttcctgctagatttcaaacgagaactggtctatgatgacgtcttctccgtgtgggag
actatctgggcggctaagcacgtgtcctccgcccactacgtgctgttcatcgcgctggca
ctggtggaggtctaccgagacatcatcctggagaacaatatggacttcaccgacatcatc
aagttcttcaatgaaatggccgagcggcacaatgcaaagcagattctgcagcttgcccgg
gacctcgtgcataaggtgcagattctgattgagaacaagtga
DBGET
integrated database retrieval system