Rattus norvegicus (rat): 289081
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Entry
289081 CDS
T01003
Symbol
Colgalt2
Name
(RefSeq) procollagen galactosyltransferase 2 precursor
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00310
Lysine degradation
rno00514
Other types of O-glycan biosynthesis
rno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
289081 (Colgalt2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
289081 (Colgalt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rno01003
]
289081 (Colgalt2)
Enzymes [BR:
rno01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
289081 (Colgalt2)
Glycosyltransferases [BR:
rno01003
]
O-Glycan biosynthesis
O-linked Gal type
289081 (Colgalt2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Glyco_transf_92
Motif
Other DBs
NCBI-GeneID:
289081
NCBI-ProteinID:
NP_001414226
RGD:
1304702
Ensembl:
ENSRNOG00000028207
UniProt:
D3Z9Z7
A6ICT5
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All DBs
Position
13:67073551..67178194
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AA seq
625 aa
AA seq
DB search
MAARRATVACALLLLSSALLRRGCPARFAAESESDEDGEETVAFPESPLQKPTVFVVVLA
RNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEILREWLKNVQRLYHYVEWRPM
DEPESYPDEIGPKHWPSSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNLM
IAENKTILAPMLESRGLYSNFWCGITPQGFYKRTPDYLQIREWKRTGCFPVPMVHSTFLI
DLRKEASDKLSFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNKEHYGYLPIPLKPHQT
LQEDIENLIHVQIEAMIDRPPMEPSQFVSVVPKYPDKMGFDEIFMINLKRRKDRRDRMLR
TLYEQEIEVKIVEAVDGKALNTSQLKAWNIEMLPGYRDPYSSRPLTRGEIGCFLSHFSVW
KEVIDRELEKTLVIEDDVRFEHQFKRKLMKLMDDIDKARLDWELIYIGRKRMQVKEPEKA
VPNVVNLVEADYSYWTLGYVISLEGAQKLVGADPFGKMLPVDEFLPIMYNKHPVAEYKEY
YESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHSWKSRKQGPI
HSNAKNTEALPPPTSLDTVPSRDEL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcgccgcgccaccgtcgcctgcgcgctgttgctgctgtcctccgccctgctc
cgccgcggctgcccggcgcgcttcgctgccgagtccgagtcggatgaggacggagaggaa
acggtggcgttccccgagtcgcccctgcagaaacccactgtgttcgtggtcgtcctcgcc
cgcaacgcagcgcacacgctgcctcacttcctgggctgcctggagcggctggactatccc
aagagcaggatggccatctgggcagccaccgatcacaacgtggacaatacaacggagata
ctcagggagtggctgaaaaacgtgcagcgtctgtatcactatgtggagtggaggcctatg
gatgagccagagtcttaccctgatgaaattggaccaaagcactggccaagctcccggttt
gctcacgtcatgaagctgcggcaggcagcccttcgaactgcgagggaaaaatggtcagac
tacatcctgttcatagatgtcgacaacttcctgactaatccacagaccctgaacctaatg
attgcagaaaacaaaaccatcctggcacccatgctggagtcccggggtctgtattctaac
ttctggtgtggaatcacacctcagggcttctataagcggaccccagactaccttcagatt
agagagtggaagaggacgggctgcttccccgtccctatggtccattccaccttcctgatc
gacctcaggaaagaggcctcggacaagctgtctttctacccgccacaccaggactacacc
tggacctttgatgacatcatcgtttttgccttctccagcaggcaagcaggcatccagatg
tacctgtgcaacaaagaacactatggctacctgcccatccctctgaagccccaccagacg
ctgcaggaggacatcgagaacctcatccacgtgcaaatagaagcaatgattgaccgtcct
ccaatggagccttcccagtttgtgtcagttgtccctaaatatccagacaagatggggttt
gatgagattttcatgatcaacctcaagcgcaggaaggacaggcgggacaggatgctgcgt
acactctacgaacaggagattgaggtcaagattgtggaggccgtggatgggaaggcactc
aacacaagccagctgaaggcctggaacattgaaatgctcccaggttaccgggacccctac
tcctccaggcccttaaccaggggtgaaatcggttgcttccttagtcacttctctgtctgg
aaagaggttattgaccgagagctggagaagactctcgtcattgaggacgatgtgcgtttt
gagcatcagtttaagaggaagctaatgaagctgatggatgacattgacaaggctcggctg
gactgggaactgatttacatcggtcgaaaaagaatgcaagtcaaagagccagagaaggcg
gtgcccaatgttgtaaatctcgttgaagctgattattcctactggacgctgggctacgtc
atctccctggaaggagcacagaagctcgttggagctgatccctttgggaagatgttgcca
gtggatgagttcctgccaatcatgtacaacaagcatcccgtggcagagtacaaggagtat
tacgaatccagggacttgaaagccttctctgcagaacctctgctcatctaccccacacac
tacacgggccagccaggctatctgagcgacacagaaacgtcaaccatctgggacaatgag
acagtggccactgactgggacaggacacactcctggaagtcccggaagcaaggacccatc
cacagcaacgccaagaacacggaagcactaccaccgccgacctctctggacactgtgcct
tcaagggacgaactctga
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