Rattus norvegicus (rat): 289633
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Entry
289633 CDS
T01003
Symbol
Nwd2
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
289633 (Nwd2)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
289633 (Nwd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
EIF3I
Beta-prop_NWD2_C
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
AAA_16
Beta-prop_WDR90_POC16_2nd
NPHP3_N
NACHT
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
AAA_22
DUF4062
AAA
NPHP3
PQQ_2
AAA_28
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
289633
NCBI-ProteinID:
XP_038948680
RGD:
1563065
Ensembl:
ENSRNOG00000051837
LinkDB
All DBs
Position
14:complement(44833623..45024962)
Genome browser
AA seq
1742 aa
AA seq
DB search
MWPAGAGTKQLCARDSALRRAAFSGNLTALPSHLVPAGRSVRVFISANPEDTGAERQALR
ETVYPKLREFCRENYGLEFQVIDLYWGVEEDEWDSPELQKMRMKLLEECLKSSAGPCFVG
LLGEKYGNIRIPGQVEASEFEMILDAAVEAKLETKLLEDWYCRDENSVPAAYYLRPRLEV
PRTNKNSTQPSATGEHERPWQEISDEIKTIFKAATKLLHEQGKMKLSQAKRYLFSAIEDE
FDFALGKQTPAFLKKCVCYIRKIANIERFVKIPEMGKYMDITGTDPRIIRDPEAQEKLIK
LRDEFIPTIVASSNLRVYTSVTHCDMKLGYSQEIENHYIEGLGKQFYEDMIDIIQATVQQ
NFDTETDTLYDEILQHSSLCKTYASFYEYKCESLNILHKYILPSKTGHINPLIVYGGPCT
GKTLLLAEVAKKAYGWLHEDTGPDSDPVVIVRFLGTTDMSIDLRTLLLSVCEQLAVNYRC
LVQSFPKKIHDLRDLFINLLNESSLQRPLVIIFDALEQLSETDEARKLWWLPAHLPRFVR
IILSTLPNKHGILQKLRCLIHEEDNYIELIPRDRKMCSQVLKHQLLRVKRKVTSGQQIYV
NNAFSKCTLPMFVNLTFREVRHWRSHKDVNESSLCVTVHESIEQLFWSLEKKCGQKLVSR
ALGYITMAKMGLSEMELEDVLALDNSVMNELIENTRPSNPLRVPYLYIARLKEGLNGYLI
ERHVKNVTLLVWANRHLQLIAQKLYLQEDSNLREMHTILADYFLGVWSGGRRKAFCLEDP
YLNGCLDLENRSLLEEEKHFIEQASFDRQAPDQPWVFQCNPLEPDIFFVNHRKMSELLYH
LTRCGKTDDLLYGIIMNFSWLYTMIKIGQFDKVLADIELAYNYSQEKELKFLASTLRGIR
NKVITFPGSLSAELQQRLLPVVSSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTYSPER
LPLASSHLHVTEILPTCNPSTVLTALENGSISTWDVETRQLLRQITTAQSVILGMKLTSD
EKYLVVATTNNTLLIYDNVNSCLLSEVEIKGTKHGSSPTYINGFTLSINHALAWLEASKD
VTVIDLLYGWPLYQFHCWYEVTCVQCSLDGVYAFCGQYLNNTTIFHLGSGEKICTVTSEF
SGGFVKFLLILDTAQEMVMIDSEGSLSVWNTEDISSPQLTEDFDCRKEDSEVVSIELSED
QSAILICKALSIELLDTGMWKVAEKFRARHNERFISAVLSKNGDCIIATMENTPAVFFWR
RDTGQCMASLKEISGTIVKLVKSSHHNMLLSLSTSGVLSIWDIDIITAMSNIDKTGKPIQ
SLVLPARGEIIYSLDGSDCVHKWNFSSGFIEAVFKHEGIVEHCVLTSAGDIMVTSDDKSS
QYVWHTSSGENLFRINGQRISQLLITHNDQFVVSLCEENASRVWRLATGHRVCNILTTLQ
NAFITSANTFVVGMTKSKVLAVSLWTGSITKKFCCEDGITIVNFKLIPDCPDIIVFITSA
ETVNLWSLTDEVICRRVQLPSNFLKNLEDFEISPNGKLGIISRGDENINVLDLHSGKLRV
VHASGVIWRQRLSRDGRYLVYICFQNGEEEEENDTVSSLIVMRLADGKNIGACSLYKTPT
FLALSQRHLNIIVGFDDGSIGIYTVVDRVDAALKIKIATSNSRQIFSNATQTSRPKSNSY
SFKVSVDCLWRESTEVFARDSPITVSDSSESNEATPSKKHNSCYDRVCAALESRSHSYTS
DN
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgtggccggccggtgcgggcaccaagcagctctgtgcccgagactccgcgctccggcgg
gcggcgttctcgggcaatctcaccgccctgccttctcacctagtacccgccggccgcagt
gtccgggtcttcatcagcgccaaccctgaagatacaggagcagaacggcaggcactaaga
gaaactgtgtatccaaaacttcgagaattctgcagagaaaactatgggttggaatttcag
gtcatagatctgtactggggagttgaggaagatgaatgggacagccccgagctgcagaag
atgcgcatgaagctgctggaggagtgcttgaaaagttctgcaggtccatgttttgttggg
ctcctaggtgagaagtacgggaacattcgaataccggggcaagttgaagcttcagagttt
gaaatgattctggatgctgctgtagaggcaaaactggagaccaagttactggaagattgg
tactgtcgggacgagaactcggtgccagcagcctattacctcagacccagactagaggtg
ccaagaaccaacaagaactcaacacagccttctgccacgggtgaacatgagaggccatgg
caagaaatatcggatgaaatcaaaacaatatttaaagctgctaccaaactgctgcatgaa
caggggaaaatgaagctcagccaggctaagaggtacctgttctcagctatcgaggatgag
tttgactttgctctgggcaagcaaactccagcattcctgaagaagtgtgtatgctacatc
aggaagattgctaacatcgaacgcttcgtgaaaatcccagagatgggaaaatacatggac
ataaccggaacggacccaagaatcatccgtgacccagaagctcaagagaagctgataaaa
ctcagggatgaattcattcctaccatcgtcgcatcctctaatctgagagtgtacacgtct
gtcactcactgtgacatgaaactgggctattcccaagagatagagaaccattacatagaa
ggacttggtaagcaattttatgaagacatgattgatataattcaggcgacagtccagcag
aactttgacacagagactgatacgctgtatgatgaaatcctgcagcactcttcactatgt
aaaacatacgcctccttctatgaatacaaatgtgaatcgctaaacatcttgcataaatac
atccttccaagcaaaaccgggcatatcaatcctctcattgtgtatgggggaccatgcact
gggaagactctactgctagctgaagtagcaaaaaaggcttatggctggctacatgaagac
acagggccagactctgacccagttgtcattgtgagatttctaggaacaacagacatgagt
attgatctgaggacacttcttctcagtgtctgtgaacaactggcagtcaactaccggtgt
ctggttcaaagctttcctaagaagatccacgaccttcgagacttatttataaacctgttg
aatgagtcttcgcttcaaagacctctggtgataatattcgatgccctagagcagctctca
gagactgatgaggctaggaagctctggtggctacctgctcatcttccccggtttgttcgg
atcatcctctccacactgcctaacaaacatgggatcctgcagaaactaaggtgccttatc
catgaagaagacaactacattgagctgattccccgggacagaaagatgtgcagtcaggtc
ctcaaacaccagttgctgagggtcaaaaggaaggtcacgtcaggccagcagatttatgtg
aataatgcattctccaagtgcacgctgcctatgtttgtgaacctaactttcagagaggtg
agacactggagatcccacaaagacgtcaatgaatcctccctctgtgtgactgtccatgaa
agtatagagcagttattctggtccttagagaagaagtgtggtcagaaactggtctccagg
gctctgggttacatcaccatggccaaaatgggtttgagtgaaatggaactggaggatgtg
ttagctctggataacagtgttatgaatgaactcattgagaacaccagacctagcaatccc
ctgagagtaccttacctgtatattgcaaggctcaaggagggtctcaatggctacttaata
gaaaggcacgtgaagaatgtcacactcttagtctgggccaacagacacctgcagctcata
gctcagaagctgtatctacaagaagacagcaacctccgtgagatgcacacaatcctggca
gattactttctaggggtgtggtcaggaggcaggaggaaagctttctgcctggaagacccc
tacttgaatggctgcctcgacttagagaacagaagtctgcttgaggaagaaaagcacttc
atagagcaagcatcctttgacaggcaggcccctgaccaaccctgggttttccagtgtaac
ccactagagcctgacatcttttttgtcaatcaccggaaaatgtctgagctcttgtatcac
ctgaccaggtgtgggaaaaccgatgacctactttatggaatcatcatgaacttcagctgg
ctttacaccatgatcaaaattggccagtttgacaaagtgcttgcagacatagaactggct
tacaactactcacaggaaaaggagctgaagttcctggccagcacactccgtggcatcaga
aacaaggtcattacatttccaggctccctttcagcagagcttcagcaacggctgctgcct
gttgtgagttccctgcccaaacttaggcaccttcttttagaatgtgacaaagatggaccc
aaatactgctccattgttcctctccattcgtccatggacgtgacatacagccctgagcgt
ctccccttagcatccagccacctacatgtcacagagatcctccctacctgtaacccaagc
actgttctcacagctctagaaaacggttccatcagcacctgggatgtagaaactcgccag
ctactccggcaaatcactacagcccagtctgttatcctaggcatgaagctcaccagtgat
gagaagtaccttgtggttgctacaacaaacaacaccttgctgatttatgacaatgtcaat
tcctgtctcctgtctgaggtggaaatcaaagggaccaagcatggaagcagccccacctac
atcaatggatttacactctccatcaaccatgcccttgcatggctagaggccagcaaagat
gtcactgtcattgatttgctctatggatggcccctttaccagttccactgctggtatgag
gtgacatgcgtccaatgctccctagatggggtgtatgctttctgtggccagtaccttaac
aataccaccattttccacttagggagtggagaaaaaatatgtacagtgacatcagaattt
tcaggtggttttgtaaagtttcttctcatcttggacacagctcaagagatggtcatgatt
gacagtgagggaagcctctccgtttggaatacagaggacatatccagcccccagctgact
gaagactttgactgtcggaaggaagacagcgaagtggtgagcattgagctttcagaggac
caaagtgcgattctgatctgtaaagctctcagcattgagctcttagacactggcatgtgg
aaggtagctgaaaaattccgagccaggcacaatgaacgatttatatctgccgtgctatcc
aaaaatggagactgtatcattgcaaccatggagaacaccccagcagtattcttctggagg
cgggacacaggacagtgcatggcaagcttgaaggaaatctcaggtaccatcgttaagctg
gtaaaatctagtcaccacaatatgctactgtctttatcaaccagtggcgttctttccatt
tgggatatagatataatcacagctatgtccaatatcgataaaactgggaaacccatccag
agtctggtgttgcctgccaggggggaaatcatttactctctcgatggctctgactgtgtt
cataaatggaacttcagcagtgggttcattgaagcggtttttaagcatgaaggaatagtc
gaacactgtgtgttgacatccgctggggacataatggtgacttcagacgacaaaagtagc
cagtacgtctggcacaccagcagtggggaaaacctcttccgaattaatgggcagaggata
tctcagctgctgatcacccataatgaccagtttgtggtctctctttgtgaggaaaatgcc
tccagggtttggaggttggccacaggacacagggtctgtaacatcttaaccactttgcaa
aatgctttcattacctctgcaaacaccttcgtggtaggaatgacgaaaagcaaagtgctg
gccgtcagcctttggacaggcagtatcactaagaaattctgttgtgaagatgggatcacc
atcgtgaattttaagttgatccccgactgccctgacatcatcgtgttcatcacgtcagct
gagaccgtgaacctctggagcctaactgatgaagtgatctgtcgccgcgtgcagcttcca
agcaacttcctgaaaaacctggaggattttgaaatttctcccaatgggaagctaggcatt
atatcccggggagatgaaaatattaatgtgctggatttacacagtggaaaactacgggtg
gttcatgcctctggagtcatctggaggcagaggctctctcgagatggtcgctacctggtg
tacatttgtttccagaatggggaggaggaggaggaaaacgatacagtatctagcttaatt
gtgatgagactagctgatggcaaaaacatcggtgcttgctcactatataaaacaccaact
tttctggctctttctcagagacacctgaacatcatcgttggctttgatgatgggagtata
gggatatacacagttgtggatagggtagatgctgccctgaagatcaaaattgccacatcg
aatagcagacagattttcagcaatgcaacgcagacatccaggccaaagtcgaacagttac
tcctttaaagtgtctgtagattgcttatggcgagagtccactgaggtctttgcaagagac
agccccattaccgtgagtgactcctctgaatccaatgaggcaacaccctccaagaaacac
aactcttgttatgacagagtgtgtgctgccctagaatctaggagccacagctacacatca
gataactga
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integrated database retrieval system
