Rattus norvegicus (rat): 289693
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Entry
289693 CDS
T01003
Symbol
Dhx15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
289693 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
289693 (Dhx15)
03009 Ribosome biogenesis [BR:
rno03009
]
289693 (Dhx15)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
289693 (Dhx15)
Spliceosome [BR:
rno03041
]
Complex A
U2 snRNP components
U2 related factors
289693 (Dhx15)
Complex B
289693 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
289693 (Dhx15)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
90S particles
Helicases
289693 (Dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
289693
NCBI-ProteinID:
NP_001178526
RGD:
1308072
Ensembl:
ENSRNOG00000003844
UniProt:
A6IJI2
D3ZD97
LinkDB
All DBs
Position
14:62999886..63037829
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRERDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaggcatcggttggacctgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagaccgggaacgagatcgggatagagaggaccgatctaaagatcga
gaccgagaacgtgatagaggagacagagaacgggagagggagaaagaaaaggaaaaggaa
ttgagagcttccaccaatgctatgcttatcagtgctggattgccacctttaaaagcttct
cattccgctcattcaacccactccgctcattcaacacattctacacattctgcccattca
acacacaccggacatgcaggacacacatcacttccacagtgtattaatccatttaccaac
ctgccccatactcctcgatattatgatattctaaagaaacgtcttcagctccctgtttgg
gaatacaaggatagatttacagatattcttgttagacatcagtcatttgtactggttggt
gagactgggtctggtaaaacaacacagataccacagtggtgtgtggagtatatgcgatcc
ttgccaggacccaaaaggggagttgcctgtacacagcccaggagagtggctgcaatgagt
gtggctcagagagttgctgatgagatggacgtgatgttaggccaggaagttggatactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgacgggatg
ctccttcgtgaagctatgaatgatcccctcctggagcgttatggtgtgataattcttgat
gaggcccatgaaagaacattagctacggatattcttatgggtgttctaaaggaagttgtg
agacagagatcagatttaaaggttatagttatgagtgctaccctagatgctggaaaattc
cagatttactttgataactgtcctctcttaactatacctggccgaacacatcctgttgag
attttttatactcccgaaccagagagagattatcttgaagcagcaattcgaacggtgatc
caaatacatatgtgtgaagaggaggaaggagaccttcttcttttcttgactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggtcctgaagtt
ggtgatattaaaatcattccattatattctacacttccaccccagcagcaacagcgcatt
tttgagccaccacctccaaaaaaacagaatggagcaattggaagaaaggtggttgtgtca
actaatattgcagagacctctttgacaatagatggtgtggtgtttgttattgaccctgga
tttgcaaagcaaaaggtatataaccctagaatcagagttgagtctcttttggtgacagca
attagtaaagcctcagctcagcaaagggctggtcgagctggacgtaccagacctgggaaa
tgcttcaggctgtacacagagaaagcttataaaacagaaatgcaggataacacctatcct
gagattctgcgttctaatttaggatcagttgtattgcaattgaagaagcttggtattgat
gacttggtacattttgattttatggacccaccagctcccgaaactctgatgagagcgcta
gaacttctgaattatttggccgctttaaatgatgatggagatctgactgaattgggatcc
atgatggcagaatttcctttagatccccagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgccatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtttaccacgcttttaaacaaaatcatgaatct
gttcagtggtgttatgacaacttcattaactaccggtccctgatgtctgcagacaatgta
cgacagcagctatcaagaattatggacagatttaatttgcctcgtcgaagtactgatttc
acaagcagggactattatattaatataagaaaagcattggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggtccag
ttgcatccctctactgtgcttgatcacaagcctgaatgggtgctttataatgagtttgtg
ctcacaacaaagaattatatccgaacctgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcattattgccaaacttcagtccaaggaatattcacagtactga
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integrated database retrieval system