Rattus norvegicus (rat): 289990
Help
Entry
289990 CDS
T01003
Symbol
Psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03050
Proteasome
rno05010
Alzheimer disease
rno05012
Parkinson disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05020
Prion disease
rno05022
Pathways of neurodegeneration - multiple diseases
rno05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
289990 (Psmc6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
289990 (Psmc6)
09164 Neurodegenerative disease
05010 Alzheimer disease
289990 (Psmc6)
05012 Parkinson disease
289990 (Psmc6)
05014 Amyotrophic lateral sclerosis
289990 (Psmc6)
05016 Huntington disease
289990 (Psmc6)
05017 Spinocerebellar ataxia
289990 (Psmc6)
05020 Prion disease
289990 (Psmc6)
05022 Pathways of neurodegeneration - multiple diseases
289990 (Psmc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rno03051
]
289990 (Psmc6)
Proteasome [BR:
rno03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
289990 (Psmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
RuvB_N
PRS7_OB
nSTAND3
Prot_ATP_ID_OB_N
AAA_14
DUF815
AAA_7
AAA_11
TIP49
AAA_33
RNA_helicase
TPR_MLP1_2
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
bpMoxR
DUF3829_2nd
AAA_28
DUF5906
AAA_lid_PRS2_C
TsaE
AAA_24
NACHT
ATPase
AAA_25
Occludin_ELL
AAA_17
ATPase_2
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
289990
NCBI-ProteinID:
NP_001093979
RGD:
1308825
Ensembl:
ENSRNOG00000007203
UniProt:
Q32PW9
A6KDZ6
G3V6W6
Structure
PDB
PDBj
LinkDB
All DBs
Position
15:21022314..21043785
Genome browser
AA seq
403 aa
AA seq
DB search
MALPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcccttcccggcatcccctatgagcgacggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaagctgctagaacacaaggagattgacggccgtctt
aaggagctaagggaacaattaaaagaacttaccaagcagtatgaaaagtctgaaaatgat
ctgaaggcactacaaagtgttggacagattgtaggcgaagtgcttaaacagttaacagaa
gaaaagttcattgttaaagcaacaaacggaccaagatacgtcgtaggctgtcgtcggcag
cttgataaaagtaagctgaagccaggaaccagagttgctttggatatgaccaccctaacc
atcatgaggtatctgccgagagaggtggatccattggtttataacatgtctcatgaggat
cctggaaatgtatcttattctgagattggaggcctgtcagaacagattcgggaattaaga
gaggtaatagaattacctcttacaaatccagaattattccagcgtgtaggaataatacct
ccaaaaggctgtttgctctatggaccaccaggcactgggaaaacactcttggcacgagct
gtcgccagccagctggactgcaacttcctaaaggttgtgtcaagctctattgtagacaag
tacattggggaaagcgctcgtttgattagagaaatgtttaattatgccagggaccaccag
ccatgcatcatttttatggatgaaatagatgctattggtggtcgtcggttttctgaggga
acatcagctgacagagagattcagagaactttaatggagttactaaatcaaatggatgga
tttgacactcttcatagagttaaaatgatcatggctacaaacagaccagatacactggat
cctgctttgctgcgcccaggaagattagatagaaaaatacatattgatttaccaaatgaa
caagcaagattagatatattgaaaatccacgctggtcctattacaaagcatggtgaaata
gattatgaagccattgtaaagctttcagatggctttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgcaattcgtgctgatcatgattttgtagttcaggaagac
ttcatgaaagcagtcagaaaagtggctgactccaagaagctagagtccaaactggactat
aaacctgtgtaa
DBGET
integrated database retrieval system
