Rattus norvegicus (rat): 290637
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Entry
290637 CDS
T01003
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1 precursor
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00310
Lysine degradation
rno00514
Other types of O-glycan biosynthesis
rno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
290637 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
290637 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rno01003
]
290637 (Colgalt1)
Enzymes [BR:
rno01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
290637 (Colgalt1)
Glycosyltransferases [BR:
rno01003
]
O-Glycan biosynthesis
O-linked Gal type
290637 (Colgalt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
290637
NCBI-ProteinID:
NP_001099537
RGD:
1309002
Ensembl:
ENSRNOG00000023317
UniProt:
A6K9X0
F6T463
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Position
16:18353779..18366087
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AA seq
617 aa
AA seq
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MAALPCWSRGLLLLPLLLLLLLLGGPRGADGYFPEERWSPESPLQAPRVLIALLARNAAP
ALPATLGALERLRHPRERTALWVATDHNTDNTSAILREWLVAVKGLYHSVEWRPAEEPSS
YPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDSDNLITNPDTLSLLIAENK
TVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLIDLRKA
ASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRSHSSLQDEA
ESFMHVQLEVMVKHPPVQLSRFISAPKKTADKMGFDEVFMINLKRRLDRRERMLRALHEQ
EIDFQLVEAVDGKAMNTSQVEAMGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIWKEVVD
RGLQKSLVFEDDLRFEIFFKRRLMNLMQDVEREGLDWDLIYVGRKRMQVEHPEKAVPRVR
NLVEADYSYWTLAYVISLQGAQKLLAAKPLAKMLPVDEFLPVMFDKHPMSEYKSHFSPRN
LRAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEQVKTDWDRAKSQKMREQQALSREAK
NSDVLQSPLDSTARDEL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgccctgctggtcgcgcgggctgctgttgctgccgctgctcctcctgttg
ctgcttctgggcggtccgcgcggcgctgatggctacttcccagaggagcgctggagccct
gagtccccgctacaggcgcctcgcgtgctcatagcgctgctggcgcggaacgccgcaccc
gcgttgccggccacgctgggcgccctggaacggctgcgccacccacgggagcgcacggcg
ctgtgggtggccacagatcataatactgacaacacttcagccatacttcgagagtggctg
gtggcagtgaagggtttataccactctgtggagtggcggccggcagaggaacccagctcc
tacccagatgaagagggccccaaacactggtctgattcccgctatgaacatgtcatgaaa
ctgcgccaagcagccttgaagtcagctagggacatgtgggctgactacattctgtttgtg
gacagcgacaacttgattaccaaccccgacactctgagcctgctcattgctgagaacaag
acagtggtggcccccatgctggactcccgggcagcgtactccaacttctggtgtgggatg
acctcgcagggctactacaagcgcacccctgcctatatccccatccgaaaacgagaccgc
aggggctgctttgcagttcccatggtgcactctaccttcctcattgacctgcgtaaggcc
gcatccaggaacctggccttctacccaccacacccggactacacctggtcttttgatgac
atcatcgtcttcgccttctcctgtaaacaggcggaggtgcaaatgtacgtgtgcaataag
gaggtgtacggcttcttgcccgtgccgctacgctcgcacagcagcctgcaggacgaggca
gagagcttcatgcacgtgcagctggaggtcatggtgaagcatccaccagtgcagctctcc
cgattcatctcagcacccaagaaaactgcagacaagatgggctttgacgaggtcttcatg
atcaacctgaagcggaggctggaccggcgagagcgcatgctgcgggcactgcatgagcag
gagattgacttccagctggtagaggctgtggacggcaaagccatgaacaccagccaggtg
gaggctatgggcatccagatgctgcctggctaccgggacccctaccatgggcggccactc
accaagggagagctgggctgctttctcagccactacaacatctggaaagaggtggttgac
cggggactacagaaatcactagtctttgaggatgatctacgttttgagatcttcttcaag
agacgtctgatgaacctcatgcaggatgtggagcgtgaggggctggattgggacctcatc
tacgtgggccggaagcgcatgcaggtggagcaccctgaaaaagctgtgccccgtgtaagg
aacctggtggaggctgattactcctactggacactagcctatgtaatctccctgcaaggt
gctcagaagttgcttgctgccaagccactggccaaaatgctacctgtcgatgagtttctg
cctgtcatgtttgacaagcacccaatgtcagaatacaagagtcacttctctccccgcaac
ctgcgtgccttctccgtggagcccctccttatctaccctacacactacacgggggatgat
ggttatgtgagtgacacagagacctcagttgtgtggaataatgaacaggttaagaccgac
tgggacagagccaagtcccagaagatgcgggaacagcaagcactgagccgtgaggccaag
aactcagatgtgctccaatctccactggacagcactgcccgtgatgagctttga
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