Rattus norvegicus (rat): 290673
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Entry
290673 CDS
T01003
Symbol
Atp13a1
Name
(RefSeq) endoplasmic reticulum transmembrane helix translocase
KO
K14950
manganese-transporting P-type ATPase [EC:7.2.2.-]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
290673 (Atp13a1)
Transporters [BR:
rno02000
]
Other transporters
Primary active transporters [TC:
3
]
290673 (Atp13a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
2TM_P5A-ATPase
Hydrolase
Cation_ATPase
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
290673
NCBI-ProteinID:
NP_001099549
RGD:
1306033
Ensembl:
ENSRNOG00000010776
UniProt:
A6KAB6
G3V7I3
LinkDB
All DBs
Position
16:complement(19649065..19665126)
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AA seq
1197 aa
AA seq
DB search
MAVVGNAVPCGARPGGARGSGSPQPGRPGLAAGPALIASGDELVAAVWPYRRLALLRRLT
VLPFAGLLYPAWLGAAASGCWGWGNSWTQIPEAALLALATICLAHALTILSGHWSVHAHC
ALTCTPEHDPNKVTFVKVVPTPNNGSTELVALHRDKGEDGLEVLSFEFQKIKYSYDALEK
KQFLPVAFPVGNAFSYYQSNRGFQEDSDIRAAEKKFGSNKAEMAVPDFSELFKERATAPF
FVFQVFCVGLWCLDEYWYYSVFTLSMLVAFEASLVQQQMRNMSEIRKMGNKPHMIQVYRS
RKWRPIASDDIVPGDIVSIGRSPQENLVPCDVLLLRGRCIVDEAMLTGESVPQMKEPIED
LSPDRVLDLQADARLHVIFGGTKVVQHIPPQKATSGLKPVDNGCVAFVLRTGFNTSQGKL
LRTILFGVKRVTANNLETFIFILFLLVFAIAAAAYVWIEGTKDPSRNRYKLFLECTLILT
SVVPPELPIELSLAVNTSLIALAKLYMYCTEPFRIPFAGKVEVCCFDKTGTLTSDSLVVR
GVAGLRDGKEVTPVSSIPIETHRALASCHSLMQLDDGTLVGDPLEKAMLTAVDWTLTKDE
KVFPRSIKTQGLKIHQRFHFASALKRMSVLASYEKLGSTDLCYIAAVKGAPETLHSMFSQ
CPPDYHHIHTEISREGARVLALGYKELGHLTHQQAREVKREALECSLKFVGFIVVSCPLK
ADSKAVIREIQNASHRVVMITGDNPLTACHVAQELHFIDKAHTLILHPPSEKGQPCEWRS
IDNSIVLPLTLGSPKALALEHALCLTGDGLAHLQAVDPQQLLHLIPHVQVFARVAPKQKE
FVITSLKELGYVTLMCGDGTNDVGALKHADVGVALLANAPERVVERRRRPRDSPVLSNSG
PRVSRSTKQKSALLSPEEPPASHRDRLSQVLRDLEDESTPIVKLGDASIAAPFTSKLSSI
QCICHVIKQGRCTLVTTLQMFKILALNALILAYSQSVLYLEGVKFSDFQATLQGLLLAGC
FLFISRSKPLKTLSRERPLPNIFNLYTILTVMLQFSVHFLSLVYLYREAQARSPEKQEQF
VDLYKEFEPSLVNSTVYIMAMAMQMATFAINYKGPPFMESLPENKPLVWSLAVSLMAIMG
LLLGSSPDFNSQFGLVDIPVEFKLVIGQVLALDFGLALLADRVLQFFLGTPKLRVPS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtgggcaacgcggtaccttgcggagcccggcctggcggggcccggggcagc
gggtctcctcagcctgggcggccgggcctcgctgccgggccagcgctcatagcgagcggc
gacgaactggtggccgctgtatggccataccggcggctggcgcttctgcggcgcctcacc
gtgctgccgtttgccgggttgctgtacccagcctggctgggcgccgccgccagcggttgc
tggggatggggcaacagctggacccagataccggaggccgcactgctggccctcgctacc
atctgcctcgcgcacgcactcacaatcctgtcggggcattggtctgtgcacgcgcactgc
gcgctcacctgcaccccggagcatgatcccaacaaagtaaccttcgtgaaggtggtgcca
acccccaacaatggctccactgaactggtggccctgcaccgtgacaagggagaagatggg
ctggaggtgctgtcatttgagttccagaagatcaaatattcctatgatgccctggagaaa
aagcagttcctcccggtggccttcccagtggggaacgccttctcttactatcaaagcaac
agaggtttccaggaagactccgacatccgagccgcagagaagaagtttgggagcaacaag
gccgagatggcggtgcctgacttctctgagcttttcaaggagagagccacagcccctttc
ttcgtgtttcaggtgttctgcgtcgggctctggtgcctggacgagtactggtactacagt
gtcttcactctgtccatgctggtggctttcgaggcttccctagtgcagcagcagatgagg
aacatgtcagagatccgaaagatgggcaacaaaccccacatgattcaggtctaccgaagc
cgaaagtggaggcccatcgccagcgatgacattgttcctggggacatcgtgtccatcggc
cgctccccccaggagaacctggtgccgtgtgatgtactgctgctgcggggccgctgcatt
gtggatgaggccatgctcactggggaatctgtgccacaaatgaaggagcccattgaagac
ttgagcccagaccgtgttctagacctgcaggccgacgctcggctgcatgtcatctttggg
ggcaccaaggtggtacagcacatccccccacagaaggccacttcgggcctgaagccggtt
gacaacggatgtgtggcctttgtcctaaggactggattcaacacatcccagggcaagcta
ctacgtacaattctctttggggtaaagagggtcactgcaaacaacctggagaccttcatc
ttcatcctcttcctcctggtgttcgccattgctgcagccgcgtatgtgtggattgaaggg
accaaggaccccagccggaaccgttacaagctttttctggagtgcaccctcatcctcacc
tcggtcgtaccccctgaactgcccattgagctgtccctggctgtgaacacctccctcatc
gccctggccaagctctacatgtactgcacagagcctttccggatccccttcgctggcaag
gtcgaagtatgttgctttgacaagacgggtaccttgactagtgacagcctggtggtgcga
ggcgtggcagggctgagagatgggaaagaggtgaccccagtgtccagcattcccatagaa
acacaccgggccctggcttcctgccactccctcatgcagctggatgatggcaccctagtg
ggtgaccctctggaaaaggccatgctgacagctgtagactggacactaaccaaagatgag
aaagtattcccccgaagtattaaaactcaggggctgaaaattcaccagcgctttcatttt
gccagtgccctaaagcgaatgtctgtgctcgcctcctacgagaagctcggctccactgac
ctctgctacatcgcggctgtgaagggggcccccgaaaccctgcactctatgttttcccag
tgcccacctgactaccaccacatccacactgagatctctcgggaaggagcccgtgtcctg
gctctgggctacaaggagctagggcatctcacgcatcagcaggcccgggaggtcaagcgg
gaggcactggaatgcagcctcaagtttgtgggcttcatcgtggtctcctgtccgctcaaa
gctgactcaaaggctgtgatccgagagatccagaatgcatcccaccgggttgtcatgatc
acaggagacaacccactcactgcatgccatgtagctcaggaactgcatttcattgacaag
gcccatacgctcatcttgcatcctccctcggagaaaggccagccatgtgagtggcgctcc
attgataacagcatcgtactgcctctgaccctgggctcccccaaggccctggccctggag
cacgcgctgtgcctcacaggtgatggcttggctcacctgcaggctgtggatccccagcag
ctgctccacctcatccctcatgtgcaagtgtttgcccgtgtggcccccaagcagaaggaa
ttcgtcatcaccagcctgaaggaactgggttatgtgacccttatgtgtggagatggcacc
aatgatgtgggcgcactaaagcacgctgatgtgggtgtcgcgcttctggccaatgcccct
gagagggttgtagaacggcgacgacggccaagggacagccctgtcctgagtaacagtggc
cccagagtctccaggtcaaccaaacagaagtcggcactcctctctcctgaggagccacca
gcctcccacagggaccgcctgagccaggtgctacgggacctggaggatgagagcacccct
attgtgaagctgggggatgccagcattgcagcacccttcacctccaagctttcctccatc
cagtgcatctgccacgtgatcaagcagggccgttgcacattggtgacaacgctgcagatg
ttcaagatcctggccctcaatgccctcatcttggcatacagccaaagtgtcctctacctg
gagggtgtcaagttcagcgacttccaggccaccctgcaggggctgctgctggccggctgc
ttcctctttatttcccgctccaagcctctcaagactctttcccgagagcggcccctgccc
aacatcttcaacctatacaccatccttacggtgatgctgcagttctctgtccacttcctg
agcctggtctacctgtaccgggaggcccaggcacgcagccctgagaagcaggaacagttt
gtagacctgtacaaggagtttgagccgagcctggtcaacagcactgtgtacatcatggcc
atggccatgcagatggctacctttgccatcaactacaagggcccacccttcatggagagc
ctgcctgagaacaagcccttggtgtggagtctggcagtgtcactgatggccatcatgggc
ttgctcctgggctcctcccctgacttcaacagccagtttggcctcgtggacatccctgta
gagttcaagctggtcatcggccaggtcctggccctggacttcggcctggcactcctggct
gaccgtgtcctacagttctttttggggactccgaagctgagagtgccctcctga
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