Rattus norvegicus (rat): 290851
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Entry
290851 CDS
T01003
Symbol
Vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
290851 (Vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
290851 (Vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
290851 (Vps36)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
290851 (Vps36)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
290851 (Vps36)
Exosomal proteins of colorectal cancer cells
290851 (Vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
BBL5
PH_TFIIH
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
290851
NCBI-ProteinID:
NP_001099562
RGD:
1309754
Ensembl:
ENSRNOG00000012654
UniProt:
B1H248
LinkDB
All DBs
Position
16:complement(76512851..76537235)
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRVYDGEEKIKFDAGTLLLSTHRLIWRDQKNNECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWETVPVSQSLQTKKGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKEKQGDVTEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEGLKLP
VRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagatcaacgagaccctggtgatccag
cagcgaggagtgcgcgtctacgacggcgaggagaagataaaatttgatgctgggactctt
ctccttagtacacaccggctgatttggagagaccagaaaaacaatgagtgctgcatggcc
attcccctatcgcagattgtgttcatcgaggagcaggcggctggaattgggaagagtgcc
aaaatcgtggttcatctgcacccagcccctcctaacaaagaacccggcccattccagagc
agtaagaactcctacatcaagctctccttcaaagagcatggtcagatcgagttttacagg
cgtttatcagaggagatgacccaaagaagatgggagacagtgccagtttcccagtcacta
caaacaaagaaaggaccccagccaggaagaataagagctgttggaattgtaggcattgaa
aggaaacttgaagaaaaaaggaaagaaacagacaaaaacatttctgaggcctttgaagac
ctgagcaagctgatgatcaaggctaaggaaatggtagagttatcaaaatcgatcgctaat
aagattaaagagaagcaaggcgatgtcacagaagacgagaccatcaggtttaagtcgtac
ttgctgagcatgggaatagccaacccagtcaccagagaaacctatggctcaggcacacag
taccacatgcaactggccaagcagctggccgggatattgcaggctcccttggaggagcgt
gggggaataatgtcactcacagaggtgtactgtttagtgaaccgagcccgaggaatggag
ttgctctcaccagaagacttagtaaatgcatgcaagatgctggaaggcctgaaactgcct
gtcagactccgggttttcgacagtggtgtcatggtaattgagcttcagactcacaaggaa
gaggaaatggtggcctcggccttagagacggtttccgagaggggatccttaacatcagaa
gagtttgccaagcttgtgggaatgtctgtccttctggctaaagaaaggctgcttcttgcg
gagaagatgggccacctttgccgagatgactctgtggaaggcttgcggttttatccaaat
ttatttatgacacagaactaa
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