Rattus norvegicus (rat): 290952
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Entry
290952 CDS
T01003
Symbol
Cntnap3
Name
(RefSeq) contactin associated protein family member 3 precursor
KO
K24337
contactin associated protein-like 3/4
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
290952 (Cntnap3)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
290952 (Cntnap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
290952
NCBI-ProteinID:
NP_001389146
RGD:
1563615
Ensembl:
ENSRNOG00000027309
LinkDB
All DBs
Position
17:273137..461233
Genome browser
AA seq
1288 aa
AA seq
DB search
MAWVKGAFLDVLLLLLLLLSAQTLPLVAAGDSHDCDAPLASSLPQLSFSSSSQLSSSHGP
GFARLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDG
GRNWKQYHQEESILGFPGNTNADSVVQYSLQPSFHTRFLRFLPLAWNPKGRIGMRIEVYG
CSYKSEVVYFDGRSSLLYKFDKGAIRPIREIISLKFKGMQNSGIIFHGKGRHGNHIALEL
IKGKLVVYLSSGNGNLPPVNSIMNFTLGSLLDDWHWHSVLIEILNYHVNFTLDKYTHHVH
VNKESNYLDLDFEISFGEILMPEGHLLTSPHKNFHGCLENVYYNGVNIIKLAKKHEPQIL
IKGNVSFTCPQPQTVPVTFQSSGSYLALPGSLREDKMSLAFQFRTWNKAGRVFFSQPEHG
SGSLVLFLTNGKLRLSLSEPGQPLQNITTGAVLNDGLWHSVSLTAEGRYLSLVVDGDFSA
QALMSVGIHLGDTYYFGGCPNNSSSSGCESPYGGFQGCLRLISIGDKVVDPIAVQQGVLG
GFSDLQIDSCGIIDRCLPNYCEHGSGCTQSWDTFSCDCDGTGYTGTTCHSSIYEQSCEAH
RHRGSPSGLYYIDVDGSGQLAPFLVYCNMTDTAWTVVQHGGPDVMTVRGGPEGHTRSATF
SYAATAAQLRAVVDTADHCEQQVDLQCRTSGPSDIGDGTSLSWWVGRTNETYTYWGGSLP
DPQKCTCGLEGNCIDSQYHCNCDADRNEWTSDTIVLSHKEHLPVTEMVVTDTGRPHSEAA
YTLGPLLCQGDKSFWNSASFNTEASYLHFPTFHGELTADVHFLFKTTISSGVFMENLGIT
DFIRIELRAPTEVTFSFDVGNGPCELTVQSLTPFNDNRWHHVRAERNVKGASLQVDQLPQ
KTQPNPADGHVRLQLNSQLFIGGTASRQKGFLGCIRSLQVNGIALDLEGRAIMTPGVEPG
CPGHCSSYGHLCRNGGKCQEKRRGIACDCAFSAYDGPLCSHEISAYFEMGSSVTYNFQER
PPLDENTSSLASSLHGDVILSRETITLSFRTTQTPCLLLYVSSFDEEYLSVILANNGSLQ
VRYKLDRHRNADAFNFDLRNLADGHFHQLMINREEAVVSVEVNQSTKRQVILSSGTEFNA
VKSLTLGKVLEPLDVDPETQQAAAQGFTGCLSSVQFGLEVPLKAALNQDLTRVTIQGGVT
AAAHCAEGPGSAVWKLSPGPSMGAGHSGSVEDRQPLPNTDRSDPGVIGGITAVVIFILLC
ASAIAIRVHQQRRLHQKNESTVSKTEEC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggtcaaaggagcattcctggatgtgttgctgcttttgctgctgctgctgtct
gctcagaccctgcccctggtagcagcgggagattcacacgattgtgacgctccattggct
tcctctttgccccagttatccttcagcagttcctcacagctgtccagcagccatggccct
ggctttgcgagactaaatcgaagagatggagctggtggatggacaccacttgtgtcaaat
aagtatcagtggctgcagattgaccttggagaacgaatggaggtcactgctgtggctacc
caggggggatatgggagttctgactgggtgaccagctacctcctgatgttcagtgatggt
ggaaggaactggaaacagtatcatcaagaagaaagcatcttgggatttccaggaaacaca
aatgcagacagtgtggtgcaatatagtctccagccttccttccacaccaggttcctgcgc
tttctccccttagcctggaaccccaagggcaggattggaatgcggatagaagtatatggg
tgttcatacaaatctgaagtggtttattttgatggacgaagttctctgctctacaaattt
gataaaggtgccataagaccaataagagagattatttctttgaaatttaaaggcatgcag
aacagtgggattatattccatggaaaaggacgacatgggaatcacattgctttggaatta
atcaagggaaagcttgttgtgtatcttagttcaggcaatggaaacctgccccctgttaat
tctatcatgaacttcaccctaggcagccttctggatgactggcactggcactctgtgctc
attgagatcctcaattaccatgtgaacttcaccctggacaaatacacacatcatgtccat
gtgaacaaggaatccaattacttggatcttgattttgagatcagctttggagaaattctg
atgcctgaaggacatttgctgacatccccacataaaaattttcatgggtgtttagaaaat
gtttattacaatggagtcaatattattaaattggccaagaaacatgaaccacaaatccta
attaagggaaatgtgtccttcacgtgtccacagccacagacagttccagtgacttttcag
agttctgggagttacctggctttgccaggcagtttaagggaagataaaatgtcccttgct
tttcagtttcgaacgtggaacaaggcaggacgagtgttttttagccaaccagagcatggt
tcaggaagtttggtcctgtttcttacgaatggaaaactcagactgagcctctctgagcca
ggtcaacccttgcagaacatcacaacaggagccgtactgaacgatgggctgtggcactca
gtttccttgactgctgagggtcgctacctaagccttgtggtagatggagacttctctgct
caggccctgatgtctgtggggattcacttgggcgacacttactattttggaggttgtccc
aacaacagctctagctctggatgtgaaagtccttatggaggcttccagggctgcctgagg
ctcatctctattggtgacaaagtggtggatcctattgcagtacagcagggagtgctgggg
ggcttcagtgacctccagatagactcctgtggcatcatagaccggtgtttgcccaactac
tgtgaacatgggagtggatgtacccagtcatgggacaccttctcctgtgactgtgacggc
acaggctacactggaacaacctgccattcctccatctatgaacagtcttgtgaagcccac
aggcacagagggagcccttctggactttactacattgatgtagatggaagtggacagctg
gcgccatttcttgtgtactgcaatatgacagacacagcatggactgttgttcagcacgga
gggcctgatgtcatgacagtcagaggtggcccagaaggacatacgcgttctgcaaccttc
tcctacgctgccactgcagcacagctgcgtgctgtggtggatactgcagaccactgtgag
cagcaggtggacctacaatgcaggacctcagggccctcagacataggagatggaacctca
ctgagctggtgggttggaagaaccaatgaaacatacacttactggggaggttctctgcct
gatcctcaaaagtgtacttgcggattggaggggaactgcattgattctcaataccactgc
aactgtgatgctgacaggaacgaatggaccagtgacacaatagtcctttcccataaggag
cacctgccggtcactgagatggtggtgacagacacaggccgtccacactctgaagctgct
tatacgctggggcctttgctttgccagggagacaagtcattttggaattcagcttccttc
aacaccgaggcttcgtaccttcatttcccaactttccatggagagctcactgctgatgtc
cacttcctttttaagaccaccatttcttctggtgtattcatggagaatctgggaatcact
gatttcatcagaatagagttgcgagctcccacagaagtgaccttttcctttgatgttggg
aatggaccttgtgaactcactgtacagtcgctgactccctttaatgacaaccggtggcat
catgtgagggcagaaaggaatgttaagggagcatctcttcaggtagaccagctccctcag
aagacacaacccaatcctgctgatggacatgttcgactgcaactcaacagccagctcttc
attggggggacagccagcaggcagaagggcttcctgggatgtatccggtccctccaggtg
aatggaatagcactggacctggagggaagggccataatgacaccaggagtggagccagga
tgtccaggtcactgcagcagctatggacacctgtgtcgcaatggaggaaagtgtcaagag
aaacgcagagggattgcttgtgactgtgccttctctgcctacgatgggccactgtgctca
catgagatttctgcctattttgaaatgggctcctcagtgacctataattttcaagaacgt
ccgcccctcgatgaaaacaccagctctctggcttcttcattacatggggatgtcatcctg
tccagagaaaccatcacgttgagcttccgaaccacacagacaccatgcttattgctttat
gtgagctcttttgatgaggaatacctttcagttatcctggccaacaatggaagtttgcag
gtgaggtacaagctggacagacatcggaatgcagatgctttcaactttgaccttagaaac
ttagcagacggtcactttcaccagctgatgattaacagagaagaagcagtagtctctgta
gaggttaaccagagtacaaagagacaagtcatcttgtcctcagggactgaattcaatgct
gtcaaatcactcacattgggaaaggttttagaacccctggatgttgaccctgaaacacag
caggcagctgctcagggcttcacaggctgcctctcttctgtgcaatttggcttggaagtc
ccactgaaggctgcactgaatcaggacctgaccagagtcactattcaaggtggtgtgact
gctgcagctcattgtgcagagggtcctggctctgcagtgtggaaactgtctccagggccc
tctatgggtgcaggtcactctggatctgtagaagatagacagccccttcctaacacagac
aggagtgaccctggggtcattggaggaataacagcagttgtgatatttattttgctctgt
gcatccgccatagccatacgggttcatcaacagagaagattacaccaaaaaaatgagtca
acagtctcaaaaactgaagagtgctag
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