Rattus norvegicus (rat): 291100
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Entry
291100 CDS
T01003
Symbol
Irf4
Name
(RefSeq) interferon regulatory factor 4
KO
K09445
interferon regulatory factor 4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
291100 (Irf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
291100 (Irf4)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
291100 (Irf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
TadF
Motif
Other DBs
NCBI-GeneID:
291100
NCBI-ProteinID:
NP_001099578
RGD:
1308050
Ensembl:
ENSRNOG00000061070
Vega:
OTTRNOG00000001790
UniProt:
D3ZEX6
A6J7L4
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All DBs
Position
17:complement(33930460..33948842)
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AA seq
450 aa
AA seq
DB search
MNLETGSRGSEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWENEEKSVFRIPWKHAGKQ
DYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISD
PYKVYRIVPEGAKKGAKQLTLEDTQMAMGHPYPMTAPYGSLPTQQVHNYMMPPHDRSWRD
YAPDQSHPEIPYQCPVTFGPRGHHWQSPSCENGCQVTGTFYACAPPESQAPGIPIEPSIR
SAEALALSDCRLHICLYYRDILVKELTTSSPEGCRISHGHTYDVSNLDQVLFPYPDDNGQ
RKNIEKLLSHLERGLVLWMAPDGLYAKRLCQSRIYWDGPLALSSDRPNKLERDHTCKLFD
TQQFLSELQVFAHHGRPAPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYFFAQQN
SGHFLRGYELPEHISTPDYHRSLRHSSIQE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggagacgggcagccggggctcagagttcggcatgagcgcggtgagctgcggc
aacgggaaactcagacagtggctgatcgaccagatcgacagcggcaagtaccccgggctg
gtgtgggagaacgaggagaagagcgtcttccgcatcccgtggaaacacgcgggcaaacag
gactacaaccgggaggaggacgcagccctcttcaaggcttgggcactatttaaaggcaag
ttccgagaagggattgacaagccagatcctcctacttggaagacaagattacgatgcgct
ctgaacaagagcaatgactttgaggaactggtagagaggagtcagctggatatctccgac
ccatacaaggtctacaggattgttccagagggagccaaaaaaggagcaaagcagctcact
ttggaagacacacagatggccatgggccacccctaccccatgacagcaccttatggctct
ctgccaacccagcaggttcataactacatgatgccaccccatgacaggagctggagggat
tatgcccctgaccagtcacacccagaaatcccatatcaatgtcctgtgacgtttggcccg
cgcggccaccactggcaaagcccatcttgtgaaaatggttgccaggtgacaggaaccttt
tatgcttgtgccccacctgagtcccaggctcctggaatccccattgagccaagcataagg
tctgctgaagccttggcgctctcagactgccggctgcatatctgcctgtattaccgggac
atcctcgtgaaggagctgaccacgtccagccccgagggctgccggatctcccacggacat
acctatgatgttagcaacctggaccaagtcctgttcccctaccccgacgacaatgggcag
aggaagaacattgagaagttgctgagccacctggagaggggactggtcctctggatggcc
ccagatgggctttatgccaaaagactgtgccagagcaggatctactgggatgggcccctg
gcactgtccagtgatcggcccaacaaactagaaagagaccacacttgcaagctctttgac
acgcagcagtttctatcagagctacaagtgtttgctcaccacggccggccagcaccgaga
ttccaggtgactctgtgctttggggaggagtttccagaccctcagagacagaggaagctc
atcacagctcatgtggaacctctgctagccagacaactgtatttttttgctcaacaaaac
agtggacattttctgaggggctatgaattacctgaacacattagcactccagattaccac
cggtccctccgtcattcttccatccaagagtga
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