Rattus norvegicus (rat): 291377 Help Entry 291377            CDS       T01003                                  Symbol Rttn Name (RefSeq) rotatin   KO K16484   rotatin Organism rno  Rattus norvegicus (rat) Brite KEGG Orthology (KO) [BR:rno00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:rno03037]     291377 (Rttn) Cilium and associated proteins [BR:rno03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    291377 (Rttn) SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N VPS18_solenoid_2nd Motif Other DBs NCBI-GeneID:  291377 NCBI-ProteinID:  NP_001163907 RGD:  1306706 Ensembl:  ENSRNOG00000038200 LinkDB All DBs Position 18:84495813..84673079 Genome browser AA seq 2228 aa AA seqDB search MVLAGLIRKLGHQLTEIRERALKSILCKIEHNLICCADLIQERLLFLHLLEWFNFPSVPM KEEVLNLLSRLVKYPPAVQHLIDLGAVEFLSKLRPNVEPAIQAEIDGILDGLFILPSEVP ALRSATYQPDQNELSQQPEVLTGYFPQDKSNLQQMEVPPGPVGNPTVKWLRFSVFPWLPL TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQGLLCLVKLA FGGDGKHRLALQSVSCLQQLCTSLRNRLNFYRDPNLFSNKQDTISQNSSLSYCHEARGPY HSPNPSPGSSSSRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRLSVRSPLDVAHA DLPELETEDALELHFQQLSLPQFCISTLDAAVPLLRTGSREMVIRVLELLGEDLLLIGQA ISSEIWDDNSLFAIDVKEKLLQVLGSLGETMCYRKTSFSLEQAEAILVHHRMAFVSISLF TVRLLQILLPVEKASEFLPESMSAALFFVSLDMPISLEYPEIHDTVVAYLEQLDSENYSI YKRTAEAVYSIECTCNFLSDVGKEGEKNLLELVELADQALRSFSYHQHSPLIKEVICLCS KIWKSAQASPLLQGESQKVFLHMLSHPLPQVKVETYQCCLEIVKECLGVHNVTKPVSSLC SGIHFLLHPKVLYEISAFGIQESKNEVNAAAKAVLLYLLQGRFMMTALTWNKFIESLCPV IPVLQGYADTEDPLGNCILLLSKVSSETGEGILPCTTRLKSVLRLLLVKKPSVRSLALKL LAFHLTGEEGADTKRPFVDARVLSRVTNLFIVKKPIDLKLDDRRELVIKLETVKKVYEIF TSDDVDLVLRKSAAEQLAVIMQDIKMHTVVKKLCLIEKIIGYLNEFVGQDGKVIECLIRP CLTLLRKVVCADLVIRASLSQQASLLTLLLRVSLIFHEDCAVVAEVGALFCLLLFDEVSR MDMWSDNSSNKPSLSSVFSLPVSVFRRYHLPVYVNGHHAVSPYSIVLPLSTECLALKPVS DMLRIAWNLAWYHGSDNLLKQTTSETKIQEFSDTLQLSTEDILTLKITYTDSGLKDCLQS IVQAGGHRDVRAAITRMSFYLLNDKLSLKDDIGPCGFTLKSLAWHTVLNRFLQVLPACTE DEKLLIDIIHFLNKLIKEQRKNPSVELLNWILELLLRHNPNPLLDLLVLTESHTREVTDE IRTAVRQQLQKELITLLNSLLLVCMTVSDRKCLELFYVFQTQLSLKLLQCLRVTDAPHFY GLPSLERTLAGMAHLTASPGWSAHSPLSKPLEICGKYLSGLLEVITSFYVERGGNAMSFM GKGVTKSTVLCLLHLSHEMIVQAPNSEWMPLWFLPLGSHSEENVPSQQGLAWLIPLWVDR DPEVRFTSLGLGSALTTMEAGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFI LQNLLVIPMPSKVIKDYTWQGPCVHDEDSGLSLSGKPALQALLYHCRFYEHLTHMVKHCY VGRYMFDFNISAFTETSEYNDLNGLDDSFKFWRAPSGTSTQDHEPSSLSTSETMVAASVV SAEIQPLLPSTLLPEPAALDQFVTQGHLHSVRPVRPRDSSPSASLHRQCVFVTPSLLSAV CSLLDNLLAVTPRDAANAFQQAHLIELLCSTMDASLLEMCVQELKTPLSLSSAVEHTQAQ TSFFLEYLSSLFQLLKSCLLVDPKLVTQDELLKPLITNVIRVLIVCTKDVLDVQLVLAFH RTWTHLFDLLATLLRKAGAVSLVPLTSALAKHWEAVTDTLCRCVGLSVKCPALSIASLQF LSVLLAEEEKRRVQDKDKTNACQTPTVAFLLDGTQGSLRSSERLNETILQCYEGISSKDV LKRVAANALMSLLAVSRRAQRHALKSDLIENCVEQMKHINAQLNLDVLRPGKAALKKKED GIIKELSITLQLLRNCLYQNEECKVAAFEAHLVPVLHSLWPWLLMEDSLMQIALQLLCVY TANFPTGCSSLCWSNYGQYIQTAHRGTPSSSLILCALKLASQVPAENTPIQQAVFMFLSN LALSHDCKGVIQKSNFLQHFLSLTLPKGGNQHLSNVTILWLKLLLNMSFGEDGQQMILRL DGCLDLLIEMSKYTHKSSPHVPLLIFHNICCSPANKPKILANEKVVTLLATCLESENQNA QRIGAASLWALTYNYQKAKATLKNPSIKRKIDEAYSIAKRTFSNSEEDPLNSYYLKCLEN LVQLLNCS NT seq 6687 nt NT seq  +upstreamnt  +downstreamnt atggttctggcggggctcatcaggaagctcggccatcagctgacagagatcagggaacgc gccctcaaaagtatcctgtgcaagatcgagcacaacttgatctgctgtgctgacttgatt caggaaaggttgctttttctccatttgcttgaatggttcaatttcccgtccgtcccaatg aaagaggaggttctgaacttgttaagcagattggttaagtatcctccagctgtccaacac ttgattgaccttggtgcagtagagttcttatctaagctccgtccaaatgtggagccagca attcaggctgagattgatggcattctcgatggacttttcattcttccttcagaagttcct gcactgcgttctgccacttaccaacctgatcaaaatgaattgtcacaacaacctgaagtt ttaacaggctattttccccaagacaaaagtaatctccagcagatggaagtcccaccaggg ccagtgggaaacccaactgtgaagtggctgaggttctctgtgtttccttggctacccctg accacaacagacagacatgttctctcctccaatgaaagctccttgagaagtagtaaccac actctgatctggaacacctgtgagcttctgaaggacgtgatcatgcaagactttcctgcg gagatttttcttcagaggcctaagattgttcagggccttttgtgtctggtgaagctggcc tttggaggagatgggaagcatcgtctcgccttacagtcagtgtcctgtttgcagcagctg tgcacaagcttaagaaacagactcaacttttacagagatcccaaccttttctcgaataaa caagacacaatctcccagaattcttctttgtcttactgtcatgaagcaagaggtccttac cattccccaaacccgtccccaggaagcagtagctctcggccttccgtggttgggcgtaca ggccagcgaccccgaggagatggccaggactgggatgcagtgtcttccagcgggagcagc agtcacgcacatgtgaactctaggctgtctgtgcgttctcccttggatgtggcgcatgca gatctgccggagctggaaacagaggacgcattggagctgcacttccagcagcttagtctt cctcagttctgcatctccaccctggacgcagcagtccctctgctgaggacaggtagcaga gaaatggtaataagagttttggaactgcttggagaggacctgttgctcattggacaagca atttcatctgaaatctgggatgataacagcctttttgctatagatgtgaaagagaaactg ctccaagtgttggggtcccttggagaaactatgtgctaccgaaagaccagttttagcttg gagcaagcagaggctatactagtgcaccacaggatggcctttgtcagcatctcactgttc accgttcgactgttacaaattcttctccctgttgaaaaggctagtgagtttttgccagag tccatgtcagcagcattattttttgtctcgttggacatgcctatttctttggaatatcca gagattcatgacactgttgtggcttatttggaacagctggattctgaaaattacagcatt tataagcgaactgcagaggctgtttattcaattgaatgtacctgtaacttcctatctgat gtggggaaagagggagaaaagaatctcctagaattagtggagctggcagaccaagccttg cgtagcttttcctatcatcagcattcccccctcataaaggaagtcatctgcctttgttca aagatctggaaatctgcacaggctagtccactactccagggagagagccagaaggtgttt ctccatatgctgtctcacccattgccacaggtgaaggtggagacttaccagtgctgcctg gagattgtgaaggagtgtttaggtgtccataatgtcactaaacctgtgtcttcactgtgt agtggaattcattttctgcttcatccaaaagttctctatgaaatctctgcatttggtatt caagaatccaaaaatgaggtgaatgctgctgccaaggctgttctcctgtatctgcttcaa ggacgatttatgatgacagctctgacctggaacaagtttatcgagtctctctgtcctgtc attccagtgctacagggctatgctgatacagaagaccctttaggcaactgcattctcctt ctaagcaaagtgagttctgagacaggagaaggcattctcccctgcactacccggctgaag tctgtgctacgacttttgctagtgaaaaaaccttcggttcgctcactagcattaaaactt ttagcatttcatcttaccggtgaagaaggagctgatacaaagcgcccattcgtagatgct agagttctttccagagttactaatctgtttattgtgaaaaaacctattgatcttaagttg gatgacagaagagaactagttattaagttggagactgttaaaaaggtgtatgaaatcttc acctcagatgatgttgatcttgttttaagaaagtcagcagcagaacaactagctgtgata atgcaagatattaaaatgcatactgtggtgaaaaagttgtgcttaattgagaagattatt ggatacctaaatgaattcgtgggtcaagatggcaaggttatagaatgcttgattcggcca tgtctcacactcctgaggaaggttgtgtgtgctgacctggttatccgtgcctctttgtca cagcaggcctctctcttgaccctcttactcagagtttccttgatatttcatgaagactgt gctgtggtggctgaagtcggggcattgttttgtcttctgttgttcgatgaagtatcaaga atggatatgtggtctgataattcttctaataaaccttctttgtcatcagtcttcagtttg cctgtttcagtctttagaaggtatcacctaccagtttatgtgaatggccaccacgctgtg agtccttactcaatagttttgccattatctactgaatgtttggccctcaagcctgtgtca gatatgctgagaatagcttggaacctggcatggtatcatgggagtgataatctattgaaa caaacgacctctgaaactaaaattcaggaattttcagatacactgcagctgtccacagaa gatatccttacactgaagatcacatacacggatagtgggctgaaggactgccttcagtcc attgttcaggctggaggccacagggatgtgagggctgctattaccaggatgagtttttat cttttgaacgacaaactgtctttgaaggatgatattggtccatgtgggtttactttaaag tccttggcctggcacactgtgctgaacaggtttttacaagtacttcctgcttgcactgaa gatgaaaaactgctaatagatatcatacattttttgaataagttaataaaggaacaaaga aaaaatccatcagtagaacttttaaactggattctagaattacttcttagacataatcca aacccactattagacctgctggttctgacagagtcacatacacgagaagtaacagatgaa atccggactgctgtcagacagcaactccagaaagaattgatcactcttcttaattcctta ttgctggtttgcatgacagtttctgacaggaaatgcctggaactattttatgttttccaa acacagctgtctctgaagctactccagtgcctcagagtcacagatgctccccatttctat ggcttgccttccttggagaggaccttagcagggatggctcacctcactgcctcccctggg tggagtgcacattctcctctctcaaagccacttgagatttgtgggaagtacttgtcaggt ctcctggaggtaattacttctttttatgtggaaaggggaggaaacgctatgtccttcatg gggaaaggtgtgacgaagagcacagttctttgcttacttcatttatcccacgagatgata gtccaggcaccaaactcggagtggatgccactttggttcttgcctttgggtagtcacagt gaagaaaacgtcccttctcagcaaggattggcctggctgattcccttatgggttgatcga gacccagaggtgagattcacttcactggggttgggatcagcactgactactatggaagct ggctgtgtggccctggcaaacagttgtcagaatatttctggtgggctctggggaactgtg gtgaacattcttctggatcagtcagaatgcagtatggtgcggcgggaggctgcatttata cttcagaatctccttgtaattccaatgccttcaaaggttataaaggattatacttggcag ggcccctgtgtccatgatgaagattctggcctgtcactttcaggaaaacctgcactacag gcccttttgtatcactgccgtttctatgaacatttgactcacatggtgaaacattgttac gttggaagatatatgtttgattttaatatttctgcttttactgaaacttcagaatataat gatttaaatggtttagatgactcattcaagttctggagggccccctctgggacatctact caggatcatgagccaagttctctttctacctcagaaacaatggtggcggcttcggtggtc agtgctgagattcagcccctgctgccatcaacacttcttcctgaaccagcagcccttgac cagtttgtgacacaagggcacctgcactcagtcagacctgtgcgaccgcgtgactcatcg ccgtctgcttccctgcacaggcagtgtgtgtttgttactccgtctctgctgtcagcagtg tgtagcctcttagacaacctcttggcagttactccaagagatgctgcaaatgcttttcaa caagctcatctcatagaactcctctgtagcactatggatgcctccctcctagaaatgtgc gtccaggaactcaagaccccactgtctttatcatctgctgttgaacatactcaggctcag acttccttttttttggagtacctatcctctttgttccagcttttgaagtcctgtctgttg gtagatcctaaacttgtgacacaagatgagctcttgaaacctcttatcactaatgtcatc cgagttctcattgtgtgtaccaaagatgtattggatgtacagttagtgttggcttttcac cgcacatggacacatttatttgaccttctggccacactactgaggaaggctggtgctgtc tcccttgttcctcttacctcagctcttgccaagcactgggaggcagtgactgatacactg tgcagatgtgtgggcctctcagtcaagtgtcctgcccttagtattgccagcctccagttc ctgtctgttctcttggctgaggaagaaaagagacgtgtccaggacaaggataaaacaaat gcatgtcagaccccaacagtggccttccttcttgatggaactcagggaagccttagatct tcagagcgacttaatgaaacaattcttcagtgctatgaaggaatctcctccaaagacgtc ctgaaaagagttgctgcaaatgctctgatgtcacttctggctgtcagcagaagagcgcag aggcatgcgttgaaatctgatctcatagaaaactgtgtggagcagatgaagcacatcaat gcacaactgaacctagatgtgctgaggcctgggaaagcagcactaaaaaaaaaggaggat ggcatcattaaagagttaagcattaccctgcagctcctaagaaactgcctttatcaaaat gaagaatgtaaagtggcagcttttgaagcacatcttgtgcctgtcctgcactctctctgg ccttggcttttgatggaagattcattgatgcaaattgccttgcagttgctttgtgtctat actgcaaattttccaactggctgtagttccctttgttggtcaaattatggacagtatatt caaaccgcacacagaggcacccccagcagctccctgatactgtgtgccctgaaactggct tctcaggtgcctgcagagaacacccccattcagcaggcggtttttatgtttctttcaaac ctggctttatctcatgactgcaagggagtaattcagaagagcaactttctacagcacttc ctgtccctaacattgcctaaaggaggaaatcaacatctcagcaatgtgaccattctatgg ttgaagttgctcctgaatatgtcgtttggagaagatggacagcaaatgatcctgagactg gacggctgcttagacttactcatcgagatgagcaagtacacacacaagagcagccctcac gtgcctctgctgatctttcataacatttgctgcagtcctgctaataagcctaaaattctg gctaatgaaaaggttgttactcttctggctacctgcttagaaagtgagaatcaaaatgcc cagaggattggagcggcttcactttgggctctaacatacaattaccagaaggcaaaagca actttgaaaaatccatcaattaaaagaaaaatagatgaagcatattccatagcaaagaga actttctcaaactcagaagaagaccctctaaattcctactatttgaaatgccttgagaat cttgtacaactgcttaactgttcctga

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