Rattus norvegicus (rat): 291414
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Entry
291414 CDS
T01003
Symbol
Ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rno01009
]
291414 (Ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
291414 (Ctdp1)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
291414 (Ctdp1)
Protein phosphatases and associated proteins [BR:
rno01009
]
HAD phosphatases
Fcp/Scp phosphatases
291414 (Ctdp1)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
291414 (Ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
NIF
BRCT
PTCB-BRCT
Biotin_lipoyl
LIG3_BRCT
RTT107_BRCT_5
HlyD_3
BRCT_2
HlyD_D23
Motif
Other DBs
NCBI-GeneID:
291414
NCBI-ProteinID:
NP_001401324
RGD:
1311755
Ensembl:
ENSRNOG00000061474
LinkDB
All DBs
Position
18:complement(76129243..76193404)
Genome browser
AA seq
973 aa
AA seq
DB search
MEAPPLAGVPTECTPAVAGAEVRCPGPAPLRLLEWKVTAGATVRIGSVLAVYEAAVSAQP
AGPAPARAASGGCVRASRTERRLRSERAGVVRELCAQPGQVVAPGALLVRLEGCSHPVVM
KGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRN
RKLVLMVDLDQTLIHTTEQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLY
ELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCI
IDDREDVWKFAPNLITVKKYVYFPGTGDVNAPPGARESQTRKKVNHSSKGADILEQALPV
KDPEEGKPPGVEQSNGLGKASRELNGGEAVPGVFSSKTDEKETWSLTRASPASSSGGREL
TEAPELPVSCEWDSRTAPGAHPTQGDATQGLDFDLSSDSESSESSRSEGQKSFSSASDGE
NEERRRRKKSPATQDRTKVPQHSGPHDTSGGRSAASPSGESGPLHPHDKVSDPDTQEEGE
RDSLCGLGNGSVDRKEAETESQNSEQSGVTAGESLDQSVGEEEEEDTDDDDHLIHLEEIL
VRVHTDYYTKYDRYLNKELEEAPDIRKIVPELKSKVLADVAVIFSGLHPTNFPVEKTREH
YHATALGAKVLTQLVLSPDAPDRATHLIAARAGTEKVRQAQECKHLHVVSPEWLWSCLER
WDKVEEQLFPLMDEDTRTHRDNSPAVFPDRHSMLPTALFHPTPIHSKAHPGPEVRIYDSN
TGKLIRMGTQGPAPALSSAPLIHGEPSSFRAVQPHQQQMFGEELPESQDGEQPGPARRKR
QPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSESEKKKAEDQDSEQERARKPRKPR
APGTRREQPAGLPSPGERSAAGTRAPRGHKRKLNEEDAASESSGESSNDDEEGSSSEADE
MAAALEAELNDLM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgccgcccttggccggcgttcccaccgagtgcactccggcggtggccggggca
gaggtgcgctgcccgggccccgcgccgctgcgtctgctggagtggaaggtgacggcgggc
gcgaccgtgcgcattggctcggtgctggcagtgtacgaagccgcagtctccgcgcagccc
gcagggccagccccggctcgcgcggcctctgggggctgcgtgcgcgcctcgcggacagag
cgcaggctcaggtcggagcgcgccggcgtggtccgtgaactgtgtgcgcagccaggccag
gtggtggcccctggggcacttctggtgcggttggaaggatgtagccaccctgttgtcatg
aagggcctgtgtgctgagtgtggccaggacctgacccagttgcagagtaaaaacggaaag
cagcaggtaccactttctacagcgactgtttccatggtgcacagtgtgccggagttgatg
gtgagctctgagcaagctgaaaaactaggaagagaagatcagcagcgactacatcgaaac
agaaagctggttctcatggtagacttggaccagaccctgattcatacgactgagcagcat
tgtccccagatgtccaacaaaggcatcttccacttccagctgggccgaggggagcccatg
ctgcacacccgcctgaggcctcactgcaaggacttcctggagaaaatcgccaagctgtat
gagctgcatgttttcactttcggcagccgtctgtatgcccacaccatcgcgggctttttg
gaccctgagaagaagcttttttctcatcgaatattatctagagatgaatgtattgacccg
ttttctaaaacaggaaaccttagaaatctctttccctgtggagattcaatggtttgcatc
attgatgaccgagaggatgtgtggaagttcgcccctaaccttataactgtgaagaagtat
gtctatttcccaggcacaggtgatgtgaacgcaccccctggggcccgggaatctcagaca
aggaaaaaagtaaatcattcttccaaaggagcggacatcttggaacaagctctgccagtc
aaggaccctgaggaaggcaaacctcctggggtggaacagagcaatggccttgggaaggcc
tcccgggagctcaatggtggtgaggctgtgccaggagttttttccagtaaaacagatgag
aaggaaacctggtccctcacccgtgcctctcctgccagcagctctggtggccgagagctg
acagaagctccagagctccctgtgtcttgtgagtgggacagtcggacagcaccaggagcg
caccctactcagggagatgccacccaaggtttggacttcgacctgtccagtgacagtgag
agcagtgagagcagcaggtcagaaggccagaagtccttctcctctgcttccgatggggag
aatgaggagaggagacgcagaaagaagtctccagccacccaggatagaacaaaagttcca
cagcacagtgggccccatgacacgagtggggggaggtctgcagcaagcccctcgggagag
tctgggcctctccacccacatgacaaagtgtccgacccagatactcaggaggagggtgag
cgagacagcctctgtggcctgggcaacggcagtgtggaccggaaggaggctgagacagag
tcacagaacagtgaacagtcaggtgtcactgcaggcgagtccctagaccagagtgttggg
gaggaagaggaagaggacacagatgacgatgaccacttgatacacctcgaggagatccta
gtgcgagtacacactgactattacacaaaatatgacagatacctcaacaaggagcttgag
gaagctccagatatacggaaaattgtgccagagctcaagagcaaggtgctagcagatgtg
gccgtcattttcagtgggctgcacccaacaaactttcctgtggagaagactcgtgagcac
tatcatgccacagctctgggagccaaggtcctcacccagctagtgctgagccctgacgct
ccagacagggccactcacctcattgcagcgcgggccggcacagagaaggtgcgccaggca
caggagtgcaaacacctgcatgtggtcagccctgaatggctgtggagctgcctggagcgc
tgggacaaggtagaggagcagctcttcccgctcatggatgaggatacccggacacatagg
gataacagccctgcagtctttccagacagacacagtatgcttcccacagccttgttccac
ccaacacccatccattccaaggcccatcctggtcctgaggttcggatctatgactctaac
acaggcaagctcatccggatgggcacccagggtcctgcaccagctctttccagtgcccca
cttatccatggagagccctcctccttcagagctgttcagccacatcagcagcaaatgttt
ggtgaagagctgccagaatcccaagatggagagcagcctggccctgctagaagaaagcga
cagcccagtatgtcagagacaatgccgctgtacactctctgtaaggaggacttagagagt
atggacaaagaggtggacgacatccttggagaaggcagtgatgacagtgagagcgagaag
aagaaggcagaagaccaagacagtgagcaggagagagcacgcaagcccaggaagcccagg
gccccaggcacccgaagagagcagccggcagggctgccctcacctggcgagaggagcgcc
gctggcacgcgtgcgcccagaggccacaagagaaaactgaatgaggaagacgcggccagc
gagtccagtggggagtccagcaacgatgatgaggagggcagcagttcggaagcagacgag
atggccgctgctctggaggcggagcttaatgacctcatgtga
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integrated database retrieval system
