Rattus norvegicus (rat): 291427
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Entry
291427 CDS
T01003
Symbol
Loxhd1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rno03037
]
291427 (Loxhd1)
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
291427 (Loxhd1)
Cilium and associated proteins [BR:
rno03037
]
Other cilia and associated proteins
Stereociliary proteins
291427 (Loxhd1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
Other domain-containing proteins
Others
291427 (Loxhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
BUD22
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
291427
NCBI-ProteinID:
NP_001099602
RGD:
1304815
Ensembl:
ENSRNOG00000017410
LinkDB
All DBs
Position
18:73093142..73245784
Genome browser
AA seq
2216 aa
AA seq
DB search
MMPQKKKRRKKDIDFLGLYEEELLNYNSEDDEDELEHEYYKAKVYEVVTATGDVRGAGTD
ANVFITIFGENGLSPKLHLTSKSESAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNAS
WYLDRVIVTDMKRPHLRYYFNCNNWLSKVEGDRQWCRDLLASFDPMDMPRGNKYEIKVYT
GDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFTLDAPDLGQLMKINVGH
NNKGGSAGWFLSKIIIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAITYIV
TVFTGDIRGAGTKSKIYLVMYGARGNRNSGKIFLEGGVFDRGRTDIFHIDLAVLLSPLSR
VSIGHGNIGVNRGWYCEKVVVLCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKK
RLKKFPWSLWVWTTDLKKAGTNSPIFIQIYGKKGRTDEILLNPNNKWFKPGIIEKFRMEL
PDLGRFYKIRAWHDRQNPGSGWHLEKMTLMNTLNKDKYNFNCNRWLDANEDDNEIVREMT
AEGPTVRRIMGMARYRVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRNNTDLFE
KGNADEFTIESVTMRKVRRVRVRHDGKGSGSGWYLDRVLVREEGQPESDNVEFPCLRWLD
KDKDDGQLVRELLPSDSNATLKNFRYHISVKTGDVSGASTDSRVYIKLYGEKSDTIKQVL
LVSDNNLKDYFERGRVDEFTLETLNIGTIIRLVIGHDSTGMHAGWFLGSVQIRVPRQGKQ
YTFPANRWLDKNQADGRLEVELYPSEVVEIQKLVHYEIEIWTGDVGGAGTTSRVYVQIYG
EEGKTEVLFLSSRSKVFDRGSKDIFQLEAADVGEIYKIRLGHTGEGFGPSWFVDTVWLRH
LVVQEESLTPEEEARRKKEKEKLRQLLKKERLKAKLQRKKKKKKKGSDEEEEGDEEEESS
SEESSSEEEEEEESEEEEEEEEYGPGMQEVIVQYKFVANRWLARGKEDNELVVELVPAGQ
PGPEPNTYEVQVITGNVPKAGTDANVYLTIYGEEYGDTGERPLKKSDKSNKFEQGQTDTF
TIYAIDLGALTKIRIRHDNTGNRPGWFLDRIDITDVNNETTYYFPCQRWLAVEEDDGQLS
RELLPVDESYVLPSEDEEGGGQGDNNPLDNLALEQKDKSTTFSVTIKTGDKKNAGTDANV
FITLFGTKDNNGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKAPGW
FVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGSIVRDLFHAELQTRLYTPFVPYEITLYTS
DVFAAGTDANVFIVIYGCDAVCTRQKFLCTNKREQKLLFERKSASRFIVELEDVGEIIEK
IRIGHDNTGINPGWHCSHVDIRRLLPEKDGTETLTFPCDRWLATSEDDKKTIRELVPYDI
FTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERY
LGKSENRTNKFEKGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDE
FLFLCGRWLSLKKEDGRLERLFYEKEYTGDRSSNCSSPADFWEIALSSKMADVDIDTVTG
PMVDYVQDGPVIPYYVSVTTGKHKEAATDSRAFVLLIGEDDERTNRIWLDFPQGKRGFSC
GSVEEFYVGGLDVGIIKKIEVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKK
KARFEREQNDTFIMEILDIAPFTKMRIRIDGLGSRPEWFLERILLKNMNTGDLTMFYYGD
WLSQKKGKKTLVCEICAVIDGEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSG
TLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYIDVKDNSR
DETFRFQCDCWLSKSEGDRQTLRDFACANNEIRDELEETTYEIVIETGNGGETRENIWLI
LEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIFLGDIASLCVGHLAREDRFIPKREL
VWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKIQSLVPVKYE
VIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELR
KVRLEHDSSGYYSGWLVEKVEVTNTSTGVATIFSCGRWLDKSRGDGLTWRELFPSV
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccagaagaagaagcggcggaagaaagacatcgacttcctgggcttgtacgag
gaggagctgctgaactacaactcggaggatgatgaggatgagttggagcacgaatactac
aaagccaaggtgtacgaggtggtcacagccacaggggatgttcgtggcgcagggacagat
gccaacgtgttcatcacgatctttggagagaacgggctctctcccaagctccatctcacc
agcaagagcgagtctgcttttgagaaagccaacgttgatgtattccgggtacggaccaat
aacgtgggcctcatctataaaatcaggatcgagcatgataacacaggcctgaatgccagc
tggtacctggaccgggttatagtgacggacatgaagaggcctcacctccgctattacttc
aactgtaacaactggctgagcaaggtggagggtgaccgtcagtggtgccgtgacctcctg
gccagcttcgaccccatggacatgcccagaggaaacaaatatgaaatcaaggtatacact
ggtgatgtgattggtgcagggacagatgctgatgtctttatcaatatctttggagagtat
ggagacacaggggagcgtaggctggaaaatgagaaagacaactttgaaaagggagctgaa
gacaagttcacactggatgcaccagatttggggcagctgatgaagatcaatgtgggccac
aacaacaaggggggttcggcaggttggttcctgtccaagatcatcattgaagatattggg
aacaaaaggaaatatgatttcccccttaaccgctggctggccctggatgaagatgatggc
aaaatccagagagacatcttagtgggcggagctgagaccacagccataacctacattgtc
actgtcttcactggggatatccgtggagctgggaccaaatctaaaatctatttggtcatg
tacggagccagaggaaataggaacagtggaaaaatctttctggaaggtggtgtgttcgac
aggggccgcacagacatcttccacatcgacctggctgtcctccttagcccactgagccgg
gtctccattgggcacggcaacataggcgtcaaccgaggctggtactgtgagaaggtggtg
gtactgtgccccttcactggcatccagcagactttcccgtgcagcaactggttggatgag
aagaaggcagacggactgattgagcgtcagctctatgagatggtgtctctgaggaagaag
cggctgaaaaaatttccttggtccctttgggtctggacaactgatctgaagaaagctggc
accaactcgcccatcttcatccagatttatgggaagaaggggcggacagacgagattctt
ctgaatcccaacaacaaatggttcaaaccaggcatcattgagaagttcaggatggagctc
ccagatctcgggaggttttataagattcgggcgtggcatgacaggcagaatcctggctct
gggtggcatttagaaaagatgactctgatgaataccttgaataaggacaaatataacttc
aactgcaaccgctggctggatgccaatgaggatgacaatgagatcgtgagggagatgacc
gcagaaggcccgactgtacggaggataatgggaatggcccggtatcgtgtgactgtatgc
acaggggaacttgaaggtgcaggaactgatgccaacgtctacctctgcctttttggtgat
gtgggggacacaggggagagactgctttacaactgcagaaataacaccgacctgtttgag
aaaggcaatgcggatgaatttaccattgagtctgtcactatgaggaaggtgaggcgagtg
agggtcaggcacgacggcaaaggctcgggcagcggctggtacctggacagggtgctggtg
agagaggaagggcagccagagagtgacaacgtggagttcccctgcctcaggtggctggac
aaagacaaggatgatgggcagctggtccgagagttgctacccagtgacagcaatgccacg
ctcaagaacttccgctatcacatcagcgtgaagacgggggatgtctctggggccagcaca
gattctcgggtgtacatcaagctctatggagagaaatctgacaccatcaagcaagttctt
ctcgtctctgacaacaacctcaaagactactttgaacgtggccgagtggatgagtttact
ctggagaccctgaacataggaactatcatcaggctggtgattgggcacgacagcactggc
atgcatgcaggctggttcctgggtagcgtccagatccgcgtgccccgccaaggcaagcag
tacaccttccctgccaaccggtggctggataagaaccaggctgatgggcgtctggaggtg
gagctgtaccccagcgaggtggtggagatccagaaattggtccactacgagattgagatt
tggaccggagatgtgggtggtgccggcaccacttcccgagtctacgtgcagatctacggg
gaagaaggcaagaccgaagtactcttcctctccagccgctccaaagtgtttgatcggggg
tccaaggacatattccagctggaagcggcggacgtgggcgagatctacaagatccgactg
ggacacacgggcgagggctttgggcccagctggtttgtggacacagtgtggctgcggcac
ctggtggtgcaggaggagagcctgacgccggaggaggaggcccggaggaagaaggagaag
gagaagttgcggcagctgttgaagaaggaaaggctgaaggctaagctgcagcggaagaag
aagaaaaagaagaaaggcagcgatgaggaggaggagggcgatgaggaagaagagtcctcc
tcagaagagtcctcctctgaagaggaggaggaggaggagtcagaggaggaagaggaggaa
gaggagtatgggccagggatgcaggaggtgattgtgcagtacaagttcgtcgctaaccgc
tggctggcccggggcaaggaggacaatgaacttgtcgtggaattggttccagctggtcag
ccgggtcctgagcccaatacctacgaggtccaggtgatcacagggaacgtacccaaggct
ggcactgatgccaacgtctacctgaccatctacggtgaggaatacggggacacaggggag
cgacccctgaagaaatcagacaagtccaacaagtttgagcagggccagacagataccttc
accatctatgccattgacctgggggctcttaccaagattcggatccgtcatgataacacg
ggcaacaggccgggctggttcctggacagaatagacatcaccgacgtgaataacgagacc
acgtactacttcccgtgccagcgctggttagcagtcgaggaggatgacggccagttatcc
agggagctgctgccagtggatgagtcctacgtgctacctagtgaagacgaggagggcggg
ggccagggtgacaataatcccctcgacaacctggctctggagcagaaagataaatcaacc
acattttcagtgaccataaagactggggacaaaaagaacgcaggcacagatgccaacgtc
ttcatcacgctctttggcacgaaagataacaacgggatgaccctcctgaagtcctccaaa
accaacagtgacaaatttgaaagggacagcattgaaatcttcaccgtggagacgctggat
ctgggagacctttggaaagttaggatcggccatgacaacacaggcaaggccccaggctgg
tttgtagactgggtggaggtggatgccccatctcttgggaagtgcatgacctttccctgc
ggccgttggttggccaagaatgaggacgacgggagcatcgtcagggatctcttccacgcg
gagcttcagacacggctctacacgccatttgtcccttatgagatcaccctctacaccagc
gatgtctttgctgctgggacggacgccaacgtcttcatagtcatctacggctgtgatgcc
gtgtgcacccggcagaagttcctgtgcaccaataagagggaacagaagctgctcttcgag
aggaagtcagcctcccgctttattgtagagttagaagacgtgggtgagatcatagaaaaa
attcggattggccatgacaacacaggcataaaccctgggtggcactgctcccacgtggac
atccgcaggctcctccccgagaaagacggtacagaaaccttgactttcccctgtgatcga
tggctcgccacctctgaggatgacaagaagaccatccgagaactggtcccctatgacatc
ttcactgagaagtacatgaaagatggatccttaaggcaggtctacaaggaagtggaggaa
cctctggacattgtgctgtactctgtgcagatcttcacagggaatgttcctggggcgggg
acagatgccaaggtctacatcaccatctacggagacctcggggacactggggagcggtac
cttggcaagtcagagaaccgcaccaacaagtttgagaaaggaacggctgacaccttcatc
atcgaggccgctgacctgggtgtcatctacaagatcaagctccgccatgacaacaccaag
tggtgtgccgactggtatgtggagaaggtggagatatggaatgacaccaatgaggacgag
tttctattcctgtgtgggcgctggctatccctgaagaaggaggatgggcggctggagagg
ctcttctatgagaaggagtacactggagaccgcagcagcaactgcagcagcccggctgac
ttctgggagatcgccctgagttccaagatggcagacgtggacattgacacagtgacagga
cccatggttgactatgttcaggatggccccgtgatcccctactatgtatcagtgactact
gggaagcacaaggaggcagccactgatagccgcgcctttgtcctgctcattggggaagat
gatgaacgtaccaaccgcatctggctggactttccccaggggaagcgaggcttcagctgt
ggctctgtggaggagttctacgttggtggcttggatgtgggcatcatcaagaaaatagag
gtgctgtatgaaatgacggtgtggactggcgatgtggtcggtggaggcactgactccaat
atcttcatgaccctctatggcatcaacgggagcacagaagaggtgcagctggacaagaag
aaggccaggtttgagcgggaacaaaatgacaccttcatcatggagatcctggacattgct
ccctttacgaagatgcgcatccgtatcgacgggctggggagccggccagagtggttcctg
gagaggatcctgttgaagaacatgaacacaggggacctgaccatgttctactacggagac
tggctgtcccaaaagaagggaaagaagacactggtgtgtgaaatatgtgcggtcattgat
ggagaggagatgatggagtggacgtcctacacagtctcggtgaagaccagtgacatcttg
ggggcaggcacggacgctaatgtgttcatcatcatctttggggaaaatggagacagcggg
accctggccctgaaacagtcagccaactggaacaagtttgagcggaacaacacagacacc
ttcaattttcctgacatgctgagcctgggccacctctgcaaactgagggtctggcatgac
aacaaagggatatttcctggatggcatctgagctacattgacgtgaaggacaattcccgt
gacgagaccttccgcttccagtgtgactgctggctgtctaagagtgagggtgacagacaa
acgctccgagacttcgcgtgtgccaacaatgagatccgcgatgagctggaagagaccacc
tacgagattgtcatagaaacaggcaacggaggcgaaaccagagagaacatctggctcatc
ttggaaggcaggaagaacagatccaaggaattccttgtggaaaattcttccagacagcgg
gcctttcggaaggggaccacagacacctttgagtttgacagcatcttcttgggtgacatc
gcctccctctgtgtgggccacctggcaagggaggaccggttcatccccaagagagagcta
gtctggcatgtcaagaccatcaccatcaccgagatggagtatggcaacgtgtacttcttt
aactgtgactgcctcatccccctcaagaggaagaggaagtacttcaaggtattcgaggtc
actaaaacgacagagagcttcgccagtaagatccagagcctggtgccagtcaagtacgag
gtcatcgtgacgacgggctacgaaccaggggcgggcactgatgccaacgtcttcgtgacc
atctttggcgctaacggggacacgggcaagcgcgaactgaaacagaaaatgcgcaacctc
ttcgagaggggcagtacagaccgcttctttctggagacattagagctgggagagctgcgc
aaggttcggctggaacatgacagcagtggctactactcgggctggctggtggagaaggtg
gaggtcaccaatactagtactggagtggccaccatcttctcctgcggcaggtggttagac
aagtctcggggcgatgggctcacctggcgagagctcttcccgtccgtctga
DBGET
integrated database retrieval system