KEGG   Rattus norvegicus (rat): 291648
Entry
291648            CDS       T01003                                 
Symbol
Pcdhb11
Name
(RefSeq) protocadherin beta 11 precursor
  KO
K16494  protocadherin beta
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    291648 (Pcdhb11)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   291648 (Pcdhb11)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th REJ
Other DBs
NCBI-GeneID: 291648
NCBI-ProteinID: NP_001395689
RGD: 1309608
Ensembl: ENSRNOG00000020066
UniProt: A6J367 M3ZCP6
LinkDB
Position
18:29400457..29404205
AA seq 797 aa
METALAKMPEQRQVVFLTILLLLWKSGSEAIRYSIPEETESGYLVANLAKDLGLKVGKLA
TRGAQIHYKGNKELLQLDAETGNLLLKVKLDREVLCGVTEPCVLHFQIILENPVQFFQTE
LQLTDINDHSPEFPDTEMLLKIPESAQTGTVFPLKAAQDSDIGSNAIQNYTVSPNLHFHV
LTHSRTDGRKYPELVLDRALDREEQPELTLTLTALDGGAPRRSGTTTVRIEVVDINDNAP
QFIRTLYKVQILENSPLDTLIVTVSATDLDAGIYGKVAYSLFQGGGDSQPFVIDEITGEI
RLSKELDFEEISHYNIEIAATDGGDLSGKCTVAIQVLDVNDNAPELTIRKLTVLVPENSA
ETAVAVFSVSDSDSGDNGRMMCSIPNNIPFLLKPTFENYYMLVTEGPLDRENRAEYNITI
TVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYNLFVQENNSPALHIGTISATDSDSG
SNAHITYSLLQLQDQQLALSSLISINPDSGQLFALRALDYESLQAFDFQVGATDGGYPAL
SSQVLVHVVVLDDNDNDPIVLYPLQNTSAPCTELLPREAESGYLVTKVVAVDHDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGEPQRSTSVTLHVL
LVNSFSQPYLPLPEVEHDPIHGDEEVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRARA
ASLGVCSVPEGHFPGHLVDVSGMGTLSQSYQYDVCLSGDSRSGEFKFLKPMIPNVMLQDS
GREVKESTPCRDSFVFS
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggagacagcgctagcaaaaatgccagagcaaaggcaagtcgtttttcttactatattg
ttactactgtggaagtctggctctgaggccattagatattccataccagaagaaacagag
agtggttacttagtggctaatttggcaaaagatcttgggctcaaggtggggaaactggcc
actagaggagctcaaatccattacaaaggaaacaaagagctcttgcagctggatgcagag
actgggaatttgcttttaaaggtaaaactagaccgcgaggtgctttgtggggtgacagaa
ccctgtgtgctgcacttccagatcatactggaaaaccctgtacagttctttcaaactgaa
ttgcagctcacagatataaacgatcattctccagagttccctgacacagaaatgcttcta
aaaatccctgagagcgcccagacaggaactgtgtttcccctgaaggcagctcaggactct
gatataggcagcaacgctattcagaactacacagtcagtcccaacctccatttccacgtc
cttactcacagtcgcacagatggcaggaaatacccagagctggtgctggacagagccctg
gatagggaggagcagcctgagctcactttaaccctcactgctctggatggtggagcccca
cgccgctcaggaaccaccacagttcgcattgaagttgtggacatcaatgataacgccccc
cagtttatacggacactctataaggtgcagattctcgaaaatagcccccttgataccttg
attgtcacggtctctgccacggatttagatgctggtatatatggaaaagtggcctattct
ctgtttcaaggcggtggagattctcaaccatttgtaatagacgaaatcaccggagaaatc
cgtctgagcaaagagctggattttgaggaaattagccattataacatagaaatcgcagcc
acggatggaggagacctttcaggaaaatgcactgtggctatccaggtgttggatgtgaat
gacaacgccccagagttgacaatcaggaagctcacagtcctggtcccagaaaattccgca
gagactgcagttgctgtttttagtgtttctgattctgattcgggggacaatggaagaatg
atgtgttctattccgaacaacatcccatttctccttaaacccacatttgagaattattac
atgttagtgactgaagggccacttgatagagagaacagagctgagtacaacatcaccatc
acggtctcagacctgggcacacccaggctcacaacccagcacaccataacagtgcaagtg
tccgacatcaacgacaacgcccctgccttcacccaaacgtcctataacctgtttgtgcaa
gagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcactgctccaactccaagaccagcagctagccctctcc
tcgctcatctccattaaccctgacagtggacagctgtttgctctcagggcactggactat
gagtcactgcaggccttcgacttccaagtgggcgccacagatggcggttatcctgcgctc
agcagtcaggttctggtgcacgtggtggtgctggacgacaatgacaatgaccccatcgtg
ctctacccactgcagaatacttctgctccttgcacagagctgctgcccagggaggcggaa
tctggttacctggttaccaaggtagtggctgtggatcacgactctggccagaatgcttgg
ctgtcgttccagttactcaaggccaccgagcccgggctgttcagcgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggctgctgagcgagcgcgatgtgcccaagcacaggctgctg
ctgctggtcaaggacaatggcgagcctcagcgctctaccagtgtcacacttcacgtgctg
ctggtgaatagtttctctcagccctatttgcctctgcctgaagtggagcatgaccccatt
cacggggatgaagaggtgctcacgctgtacctagtcattgccttggcttctgtgtcttct
ctcttcctcttgtctgtgctgctgttcgtgggggtgaggctctgcaggagggccagggca
gcctctctgggtgtctgctctgtgcctgagggccactttcctggccatctggtggatgtc
agcggtatggggaccctgtcccagagctatcagtatgatgtgtgtctgtcaggagattct
aggtctggtgagttcaaattcctcaaacccatgattcccaacgtgatgcttcaggattct
gggagagaagtgaaggaaagcaccccctgcagggatagctttgtattcagttaa

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