Rattus norvegicus (rat): 291648
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Entry
291648 CDS
T01003
Symbol
Pcdhb11
Name
(RefSeq) protocadherin beta 11 precursor
KO
K16494
protocadherin beta
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
291648 (Pcdhb11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
291648 (Pcdhb11)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
291648 (Pcdhb11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Ig_Cad99C_N
Cadherin_FAT4_N
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
291648
NCBI-ProteinID:
NP_001395689
RGD:
1309608
Ensembl:
ENSRNOG00000020066
LinkDB
All DBs
Position
18:29400457..29404205
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AA seq
797 aa
AA seq
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METALAKMPEQRQVVFLTILLLLWKSGSEAIRYSIPEETESGYLVANLAKDLGLKVGKLA
TRGAQIHYKGNKELLQLDAETGNLLLKVKLDREVLCGVTEPCVLHFQIILENPVQFFQTE
LQLTDINDHSPEFPDTEMLLKIPESAQTGTVFPLKAAQDSDIGSNAIQNYTVSPNLHFHV
LTHSRTDGRKYPELVLDRALDREEQPELTLTLTALDGGAPRRSGTTTVRIEVVDINDNAP
QFIRTLYKVQILENSPLDTLIVTVSATDLDAGIYGKVAYSLFQGGGDSQPFVIDEITGEI
RLSKELDFEEISHYNIEIAATDGGDLSGKCTVAIQVLDVNDNAPELTIRKLTVLVPENSA
ETAVAVFSVSDSDSGDNGRMMCSIPNNIPFLLKPTFENYYMLVTEGPLDRENRAEYNITI
TVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYNLFVQENNSPALHIGTISATDSDSG
SNAHITYSLLQLQDQQLALSSLISINPDSGQLFALRALDYESLQAFDFQVGATDGGYPAL
SSQVLVHVVVLDDNDNDPIVLYPLQNTSAPCTELLPREAESGYLVTKVVAVDHDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGEPQRSTSVTLHVL
LVNSFSQPYLPLPEVEHDPIHGDEEVLTLYLVIALASVSSLFLLSVLLFVGVRLCRRARA
ASLGVCSVPEGHFPGHLVDVSGMGTLSQSYQYDVCLSGDSRSGEFKFLKPMIPNVMLQDS
GREVKESTPCRDSFVFS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgctagcaaaaatgccagagcaaaggcaagtcgtttttcttactatattg
ttactactgtggaagtctggctctgaggccattagatattccataccagaagaaacagag
agtggttacttagtggctaatttggcaaaagatcttgggctcaaggtggggaaactggcc
actagaggagctcaaatccattacaaaggaaacaaagagctcttgcagctggatgcagag
actgggaatttgcttttaaaggtaaaactagaccgcgaggtgctttgtggggtgacagaa
ccctgtgtgctgcacttccagatcatactggaaaaccctgtacagttctttcaaactgaa
ttgcagctcacagatataaacgatcattctccagagttccctgacacagaaatgcttcta
aaaatccctgagagcgcccagacaggaactgtgtttcccctgaaggcagctcaggactct
gatataggcagcaacgctattcagaactacacagtcagtcccaacctccatttccacgtc
cttactcacagtcgcacagatggcaggaaatacccagagctggtgctggacagagccctg
gatagggaggagcagcctgagctcactttaaccctcactgctctggatggtggagcccca
cgccgctcaggaaccaccacagttcgcattgaagttgtggacatcaatgataacgccccc
cagtttatacggacactctataaggtgcagattctcgaaaatagcccccttgataccttg
attgtcacggtctctgccacggatttagatgctggtatatatggaaaagtggcctattct
ctgtttcaaggcggtggagattctcaaccatttgtaatagacgaaatcaccggagaaatc
cgtctgagcaaagagctggattttgaggaaattagccattataacatagaaatcgcagcc
acggatggaggagacctttcaggaaaatgcactgtggctatccaggtgttggatgtgaat
gacaacgccccagagttgacaatcaggaagctcacagtcctggtcccagaaaattccgca
gagactgcagttgctgtttttagtgtttctgattctgattcgggggacaatggaagaatg
atgtgttctattccgaacaacatcccatttctccttaaacccacatttgagaattattac
atgttagtgactgaagggccacttgatagagagaacagagctgagtacaacatcaccatc
acggtctcagacctgggcacacccaggctcacaacccagcacaccataacagtgcaagtg
tccgacatcaacgacaacgcccctgccttcacccaaacgtcctataacctgtttgtgcaa
gagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcactgctccaactccaagaccagcagctagccctctcc
tcgctcatctccattaaccctgacagtggacagctgtttgctctcagggcactggactat
gagtcactgcaggccttcgacttccaagtgggcgccacagatggcggttatcctgcgctc
agcagtcaggttctggtgcacgtggtggtgctggacgacaatgacaatgaccccatcgtg
ctctacccactgcagaatacttctgctccttgcacagagctgctgcccagggaggcggaa
tctggttacctggttaccaaggtagtggctgtggatcacgactctggccagaatgcttgg
ctgtcgttccagttactcaaggccaccgagcccgggctgttcagcgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggctgctgagcgagcgcgatgtgcccaagcacaggctgctg
ctgctggtcaaggacaatggcgagcctcagcgctctaccagtgtcacacttcacgtgctg
ctggtgaatagtttctctcagccctatttgcctctgcctgaagtggagcatgaccccatt
cacggggatgaagaggtgctcacgctgtacctagtcattgccttggcttctgtgtcttct
ctcttcctcttgtctgtgctgctgttcgtgggggtgaggctctgcaggagggccagggca
gcctctctgggtgtctgctctgtgcctgagggccactttcctggccatctggtggatgtc
agcggtatggggaccctgtcccagagctatcagtatgatgtgtgtctgtcaggagattct
aggtctggtgagttcaaattcctcaaacccatgattcccaacgtgatgcttcaggattct
gggagagaagtgaaggaaagcaccccctgcagggatagctttgtattcagttaa
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