Rattus norvegicus (rat): 291649
Help
Entry
291649 CDS
T01003
Symbol
Pcdhb10
Name
(RefSeq) protocadherin beta-5 precursor
KO
K16494
protocadherin beta
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
291649 (Pcdhb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
291649 (Pcdhb10)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
291649 (Pcdhb10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
291649
NCBI-ProteinID:
NP_001108075
RGD:
1308364
Ensembl:
ENSRNOG00000029244
UniProt:
A0ABK0LWA5
LinkDB
All DBs
Position
18:29382955..29396278
Genome browser
AA seq
793 aa
AA seq
DB search
METASEKRQVVFLTILLLLWKSDAETIRYSMPEETESGYLVANLAKDLGLRVGELATRGA
RIHHKGNKDLLQLDAETGNLILKEKPDREVLCRATEPCVLHFQIILENPVQFFQTELQLT
DINDHAPEFPDRKMLLKISESAQPGTMFPLKAAQDPDIGSNAVQNYTVSPNLHFHVITHS
RTDGRKYPELVLDRALDREEQPELTLTLIALDGGAPSRSGTTTVHIEVVDINDNPPKFDQ
SLYEVQIPENSPLNALVATVSARDLDAGIHGTVIYSLFQGGELSQPFEIDEVAGEIRLKG
TLDFEATPYYNIEIVATDPGGFSGKCSVAIQVVDVNDNAPKLTISSLNSSIPENAPEAVV
AVFSVSDPDSGENGRIVCSIQNELPFLLKPTFENYYTLVTERPLDRESRADYNITITVSD
LGIPRLTTQHTIIVQVSDINDNAPAFNQTSYTLLVRENNSPALHIGTISATDSDTGANAH
ISYLLLPLYDMQLALTSLVSINQENGQLFVLRALDYETLQTFEFSVGATDHGSPALSSQA
LVRVVVLDDNDNAPFVLYPLQNASVPCTELLPRAAEPGYLVTKVVAVDCDSGQNAWLSFQ
LLKATEPGLFNVWAHNGEVRTTRLLSERDVPKHKLLLVVKDNGEHQRSATVTLHVLLVDG
FSQPYLPLPEVARDPVQDDEDVLTLYLVIALASVSSLFLFSVLLFIGMRLCKRAREASLG
VCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPMISNLMVQDPGREV
KESPPCRDSFVFS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcatcagagaaaaggcaagtcgttttccttactatattgttgctattgtgg
aagtctgacgctgagacaattagatattcaatgccagaagaaacagagagtggttactta
gtggctaatttggcaaaagatcttggactcagggttggagaactggccactagaggggca
cgaatccatcacaaaggaaacaaagacctcttgcagctggatgcagagactgggaattta
atcctgaaggaaaaaccagatcgtgaggtgctgtgtagggcgacagaaccctgtgtgctg
cacttccagatcatactggaaaatcctgtacagttctttcaaactgaattgcagctcaca
gatataaacgaccatgctccagagttccccgacagaaaaatgcttctaaaaatctccgag
agcgcccagccagggaccatgtttcctctgaaggcagctcaggaccctgacatagggagc
aatgctgttcagaactacacagtgagtcccaacctccatttccacgtcattactcacagt
cgcacagatggcaggaaatacccagagctggtgctggacagagccctggatagggaggag
cagcctgaactcactttaaccctcattgctctggatggtggagctccttccaggtcagga
accaccacagttcacattgaagttgtggacatcaatgataacccgcccaaatttgaccag
tcgctctatgaggtgcagattcctgaaaatagtcccctcaacgccttagtcgccacggtt
tctgccagagatttagatgctgggatacacggtactgtaatctactctctgtttcaaggt
ggtgaactatctcaaccgtttgaaatagatgaagtcgcaggagaaattcgtcttaaaggg
acattggattttgaggcaactccatattataacatagaaatcgtagcgacagacccagga
ggcttttcaggaaaatgcagtgtggctatacaggtggtggatgtgaacgacaacgcccct
aaactcaccatatcttcactcaatagttccatcccagaaaatgctcctgaggctgtagtt
gctgtatttagtgtttctgacccagattctggggaaaatggaaggattgtttgttctatt
cagaacgaacttccatttcttttgaagcccacatttgagaactattatactttagtaaca
gagaggccacttgatagagaaagcagagctgactacaacatcaccatcactgtctccgac
ctgggcatacccaggctcacaacccaacacaccataatagtgcaggtgtcggacattaat
gacaacgctcctgccttcaaccaaacctcatacaccctgttggtccgcgagaacaacagc
cccgccctgcacataggcaccatcagcgccacagactccgacactggcgctaatgcccat
atcagctacttgctactgccactctatgatatgcagctggccctcacctctctggtctcc
atcaatcaagaaaatgggcagctgttcgtgctcagggcactcgactatgagaccctgcag
accttcgagttcagcgtgggtgccacagaccatggctcacccgcgctcagcagccaggct
ctggtgcgggtggtggtgctggacgacaatgacaatgcgcccttcgtgctctacccgctg
cagaacgcctctgtgccctgcaccgagctgctgcccagagcggcagagccaggatacctg
gtcaccaaggtggtagctgtggactgcgactctggccagaatgcctggctgtcattccag
ttgctcaaggccacagagcccgggctgttcaacgtgtgggcgcacaatggcgaggtacgc
accaccaggctactgagcgagcgcgatgtgcccaagcacaagctgctgctggtggtcaag
gacaatggcgagcatcagcgctctgctacagtcacactgcacgtgctgctggtggatggc
ttctcacagccctacctgcctttgccagaggtggcgcgggatcccgtgcaagatgatgag
gatgtgcttacactgtacctggtcattgccttggcatctgtgtcttcgctcttcctcttc
tctgtcctgctcttcattgggatgaggctgtgcaagagggccagggaggcttcattgggc
gtctgctctgtgcctgagggccactttcctggccacctggtggatgttagcggaactggg
actctgtcccagagctaccagtatgaggtgtgtctgactggagactctggaactggtgag
ttcaaattccttaaacccatgatctccaacttaatggtccaggaccctgggagagaagtg
aaggaaagtcccccctgcagggatagctttgtattcagttaa
DBGET
integrated database retrieval system
