Rattus norvegicus (rat): 291653
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Entry
291653 CDS
T01003
Symbol
Pcdhb6
Name
(RefSeq) protocadherin beta 6 precursor
KO
K16494
protocadherin beta
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
291653 (Pcdhb6)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
291653 (Pcdhb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
291653
NCBI-ProteinID:
NP_001014780
RGD:
1306123
LinkDB
All DBs
Position
18:29320391..29323753
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AA seq
772 aa
AA seq
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METALAKTPEKRQVVFLALLLLLWEAGSEAISYSMSEETESGYLVANLAKDLGFRAGELA
TRGARIHHRGNKDLLQLDAETGNLLLKEKPDREALCGATEPCVLHFQVILENPVQFFQTD
LQLTDINDHSPEFPDTEMLLKIQEIAQPGTVFPLKAAQDSDIGSNAVQNYTVSPNLHFHV
VTHSRTDGRKYPELVLDRALDREEQPELTLILTALDGGAPPKSGTTTVRIEVVDINDNAP
QFVKSLYAVEVPEDSPLNALVVTVSARDLDAGIHGNVAYSLFQDSGGSPPFVIDEISGEI
RLKGALDFEATPYYNMEIVATDSGGLSGKCTVAIQVVDVNDNAPKLTISSLTRSIPENAP
EAVVAVFSVSDPDSGDNGRMVCSTQNELPFLLKPTYENYYTLVTEGPLDRESRAEYNITI
TVSDLGTPRLTTQHTITVQVMDINDNAPVFTQTSYTMFVHENNSPALHIGTISATDSDSG
SNAHITYSLLPPRDPQLSLASLVSINIDNGQLFALRALDYEVLQGFEFRVSATDQGSPQL
SSQTLVSVVVLDDNDNAPFVLYPLQNASASCTELLPRAAEPGYLVTKVVAVDRDSGQNAW
LSFQMLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGEPPLSASVTLQVL
LVDGFSQPYLPLPEVRRDPSQEEDLLTLYLVVALASVSSLFLLSVLLFVGVRLCRRARET
SLGACSVPEGHFPGHLVDVSGMGTLSQSYQYEVCLTGDSGTTDFKFLNHHSQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggagacagcgctagcaaaaacaccagagaaaaggcaagtggtctttcttgctctattg
ttgctattgtgggaggctggctctgaggcaattagctattcgatgtcagaagaaacggag
agtggctacttggtagctaacctggcaaaagatctggggttcagggctggggaactggcc
actagaggggcacgaatccatcacagaggaaacaaagacctcttgcagctggatgcagag
acaggaaatttgcttctgaaggaaaagccagatcgcgaggcactgtgtggggcgacagaa
ccctgtgtgctgcacttccaggtcatactggaaaaccctgtgcagttctttcaaacagac
ctgcagctcacagatataaatgaccactctccagaattccctgacacagaaatgctccta
aaaattcaagaaattgcccagccaggaactgtgtttcctctgaaggcagctcaggactct
gacatagggagcaacgctgttcagaactacacagtcagtcccaacctccatttccacgtc
gttactcacagtcgcacagatggcaggaaatacccagagctggtgctggacagagccctg
gatagggaggagcagcctgagctcactttaatcctcactgctctggatgggggtgctcca
cccaagtctgggacaacgacggttcgaattgaagtcgtggacatcaatgataacgctccc
caatttgtaaagtctctctatgctgtggaggtccctgaagatagtcccctcaatgcctta
gttgtcacagtctctgccagagacttagatgctgggatacatggcaatgtagcctattct
ctgtttcaagactccggaggttctccgccatttgtaatagatgaaatttcaggagaaatt
cgccttaaaggggcattggattttgaggcaactccatactataacatggaaattgtagcc
acagacagcggaggtctttcaggaaaatgcactgtggctatacaggtggtggatgtgaac
gacaacgcccctaaactcaccatatcttcgctcactcgttccatcccagaaaatgctcct
gaggctgtagttgctgttttcagtgtttctgacccagattctggggataatggaaggatg
gtttgttctactcagaacgaacttccatttcttttgaagcctacatacgagaattactac
actttagtgacagaagggccactagacagagagagcagagctgagtacaacatcaccatc
actgtctcagatctgggcacacccaggctcacaacccagcacaccataacagtgcaggtg
atggacatcaatgacaatgcccctgtctttacccaaacctcctacaccatgtttgtccac
gagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcgctgctgccacctcgagacccacagctgtctcttgcc
tcactggtttcaatcaacatagacaatgggcagctgttcgcactcagggcgctggactat
gaggtcctgcagggctttgagttccgcgtgagcgccacagaccaagggtctccccagctc
agcagtcagactctggtgagcgtggtggtgctggacgacaatgacaatgcgcccttcgtg
ctctacccactgcagaacgcctctgcatcctgtaccgagctgctgcccagggcagcagag
cctggctatctggtcactaaggtggtggctgtggatcgcgactctgggcagaatgcctgg
ctgtcattccagatgctcaaggccacagagcctgggctgttcagcgtgtgggcgcacaat
ggcgaggtgcgcaccaccaggcttctgagcgagcgtgatgtacccaagcacaggctgctg
ttgctggtcaaggataatggcgagcctccactctctgccagtgtcactctgcaggtactg
cttgtggatggcttctctcaaccctacctgcctctgccagaggtgaggcgtgacccctca
caagaggaagacttgcttactctgtacctggttgttgccttggcctctgtgtcttcgctg
ttcctcctgtctgtgttattgttcgtgggagtaaggttgtgcaggagggccagggagacc
tctctgggtgcctgctctgtgcctgagggacactttcctggccacttggtggatgtcagt
ggtatggggacattgtcccagagctaccagtatgaggtgtgtctgaccggagattctggg
acaacagatttcaaatttctgaaccatcattcccaatag
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