Rattus norvegicus (rat): 291654
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Entry
291654 CDS
T01003
Symbol
Pcdhb5
Name
(RefSeq) protocadherin beta-4
KO
K16494
protocadherin beta
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
291654 (Pcdhb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
291654 (Pcdhb5)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
291654 (Pcdhb5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Ig_Cad99C_N
Cadherin_FAT4_N
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
291654
NCBI-ProteinID:
NP_001108074
RGD:
1304665
LinkDB
All DBs
Position
18:29302466..29305048
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AA seq
797 aa
AA seq
DB search
MEKLERNHANRQVIPFLFMLLWGQVLMVPTRYSVLEEAERGSFVAHLAKDLGLGAGELAA
RSARVVSDFDNQQFMVDPDTGDLLLREKLDREELCGSVDPCVMHFQVFLEKPVQFFQGEL
LIQDINDNSPEFPDKELLLKIPENSQPGTRFPLNLAQDLDVGSNGLQEYRVSTNPHFHVL
TRNNSEGKKYPELVQDRALDREEQAELSLTLMALDGRSPPRSGTALVRILIMDINDNAPE
FVNSPYEVQVPESCPPDSPILTVLAPDADAGNFGSVSYGLFQASDEIQKTFSINEVTGEI
RLKKELDFEKTESYRVEIEATDGGGLSGKGSVVIEVLDVNDNAPELTISSLTSSVPENAP
ETVVAIIRIRDRDSGDNGKMICSISDHVPFTLKPSYKNFYTLVTERALDRESRAEYNITI
SVSDQGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHENNSPALHIGTISATDSDSG
SNAHITYSLLPPYDPQLALDSLISINPDNGQLFALRALDYEALQAFEFRVAATDGGSPAL
SSQALVRVMVLDDNDNAPFVLYPLQNASAPYTELLPRAAEPGYLITKVVAVDRDSGQNSW
LSFQLLKSTEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLVVKDNGEPPRSASITLQVV
LVDGFSQPYLPLPEVARDSAKDGADLLTLYLVIALASVSSLFLLSVLLFVGVRLCRRARA
ASLGDCTVPEGHFPGHLVDVSRAGTLSQSYQYEVCLTGDSGAGEFKFLKSMVPNLMVQDP
GREIAENLHCRDSFVFS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctggagagaaatcatgcaaacaggcaagtgattcctttcctttttatgctg
ctttggggtcaggttctcatggtgcctactcggtactctgtcttggaggaagctgaaaga
ggctcctttgtagcccatctggccaaggatctggggctgggagctggggagctggctgcc
aggtctgcacgggtggtgtctgactttgacaaccagcaattcatggtggatccggacact
ggagatttgcttctgagggagaaactagacagggaggaattgtgtggctctgtggatccc
tgtgtgatgcatttccaggtgttcctagaaaaaccagtgcagttttttcaaggagaatta
ttgatccaggatataaatgacaactcgccagaattcccagataaagaattgctcttgaaa
ataccggaaaacagccagccaggcacgcggtttccattgaatttagcccaggatttggat
gtgggcagcaatggacttcaagagtacagagtcagcaccaaccctcattttcatgtcctc
actcgaaataatagtgaaggcaagaaatacccagagttggtacaagacagagccctggac
agagaggagcaggcagaattgagcttaacgctcatggctctggatggcaggtctccacct
aggtcaggaacagctctggttcgaatcctgatcatggatatcaatgacaatgctcctgag
tttgtgaacagcccctacgaggtgcaggtcccagagagctgtcccccagactccccaatt
ctgactgtcttagcaccggatgcagatgctggcaactttgggagtgtttcctatggcttg
ttccaagcatcagatgaaatccagaaaactttctcaataaatgaagtcactggagaaata
cggctgaagaaggaattggattttgaaaaaactgaatcataccgtgtagagattgaggcc
acagatggaggagggctttctgggaaaggatctgtggtgatagaggtgttggatgtgaac
gacaatgccccagagctgaccatatcttcactgaccagctcagtcccagaaaatgctccg
gaaactgtggttgctattatccgaatacgagatagagattctggagacaatggaaaaatg
atttgctctatttcagatcatgtgccattcactttaaaaccctcttacaagaacttttac
actctggtgacagagagggcactggacagagagagcagagctgagtacaacatcaccatc
tcagtctcggaccagggcacacccaggctcacaacccagcacaccataacagtgcaggtg
tctgacatcaacgacaacgcccctgccttcacccaaacctcctacaccatgtttgtccac
gagaacaacagccccgccctgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactcactgctaccgccctatgatccacagctggccctcgac
tcgctcatctccatcaacccagacaatgggcagctgttcgcgctcagggcgctggactat
gaggccctgcaggccttcgagttccgagtggccgccacagatggaggttcacccgcgcta
agcagccaggctctggtgcgcgtgatggtgctggatgacaatgacaatgcacccttcgtg
ctctacccgctgcagaacgcctctgcaccctacacagagctgcttcccagggcagcagag
cccggatacctgatcaccaaggtggtggcagtggaccgcgactctggccagaactcctgg
ctgtcgtttcagctgctcaagtccacggagcccgggttgttcagtgtgtgggcgcacaat
ggcgaggtgcgtaccaccaggctgctgagtgagcgcgatgtgcccaaacacaggctgctg
ctggtggtcaaggacaatggtgagcctccacgctctgccagcatcacactgcaggtggtg
cttgtggatggcttttcacagccttatctgccactgcctgaggtagctcgtgactctgca
aaggatggtgcggacttgctcacgctctatctggtcatcgccttggcctctgtgtcttct
ctatttttgttgtctgtgctgctgttcgtgggggtgaggctgtgcaggagagcaagggca
gcctctctgggtgactgcactgtgcctgagggccactttcctggccacctggtagatgtc
agtcgtgcagggaccctgtcccagagctaccagtatgaggtgtgtctgacaggagactct
ggggctggtgagttcaaattccttaaatccatggtccccaacctaatggttcaggaccct
gggagagaaattgcggaaaatcttcattgcagggatagctttgtattcagctaa
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