Rattus norvegicus (rat): 291655
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Entry
291655 CDS
T01003
Symbol
Pcdhb4
Name
(RefSeq) protocadherin beta 4 precursor
KO
K16494
protocadherin beta
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
291655 (Pcdhb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
291655 (Pcdhb4)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
291655 (Pcdhb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_CLSTN
Cadherin_CELSR2_9th
Ig_Cad99C_N
Cadherin_FAT4_N
REJ
Motif
Other DBs
NCBI-GeneID:
291655
NCBI-ProteinID:
NP_001108073
RGD:
1308912
UniProt:
G3V8N7
LinkDB
All DBs
Position
18:29292290..29294829
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AA seq
779 aa
AA seq
DB search
METTIAKTSQQRQVVFLTMLLLLRVSGSEAIKYSMPEETESGYLVANLAKDLGLRVGELA
TRGARIHHRGNKELLQLDAETGNLFLKEKLDREVLCGLTEPCVLQFQIILKNPVQFFQTE
LQLTDINDHAPEFPDTEMLLTIPESVQPGTVFPLKAAQDSDIGSNAVQNYTVSPNLHFHV
VTHSRTDGRKYPELVLDRALDREEQPELTLILTALDGGAPRRSGMTAVHIEVVDINDNAP
QFVQSLYEVQVPENIPLDALVVTVSATDLDAGIYGNVAYSLFQGSRDSQPFIIDEITGEI
RLSKELDFEVTPYYNVEIAAVDGGGLSGKCTVAVQVLDVNDNAPELTISTFSSPVPENSP
ETVVLVFGVFDQDSGDNGRMVCSIQNELPFLLKSTFENYYTLVTERPLDRESRAEYNITI
TVSDLGTPRLTTQHTITVKVSDINDNAPSFTQTSYTMFVHENNSPALHIGTISATDSDSG
SNAHITYSLLPPDDPQLDLDSLISINADNGQLFALRALDYEALQSFEFLVGATDEGSPAL
SSQALVHVVVLDDNDNVPFVLYPLQNASPPCTELLPRAAEPGYLVTKVVAVDQDSGQNAW
LSFQLLKATEPGLFSVWAHNGEVRTARLLSERDVPKHKLLLLVKDNGEPQRSASVTLHVL
LVDGFSQPYLPLPEVALDPTYDEDNLTLYLVVALASVSSLFLLSVLLFVGVRLCRRARAS
SLGGYSVPEGHLPSHLVNVSGMGTLSQSYQYEVCLMGESGTTDFKFLKPSIPNSLIADN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggagacaacgatagcaaaaacgtcacagcaaaggcaagttgtttttcttactatgttg
ttgcttttgcgggtgtctggttctgaggcaattaaatattccatgccagaagaaacagag
agtggctacttggtggctaacctagcaaaagatctggggctcagggttggagaactggcc
actagaggggcacgaatccatcacagaggaaacaaagagctcttgcaactggatgcagag
actgggaatttgttcttgaaggagaaactagaccgtgaggtgctgtgtgggctgacagaa
ccttgtgtgctgcagttccagatcatactgaaaaaccctgtgcagttcttccaaactgaa
ttgcagctcacagatataaacgaccatgctccagagttccctgacacagaaatgctccta
acaatccctgagagcgtccagccagggactgtgtttcctctaaaggcagctcaggactct
gatatagggagcaacgctgttcagaactacacagtcagtcccaacctccatttccacgtc
gttactcacagtcgcacagatggcaggaaatacccagagctggtgctggacagagccctg
gatagggaggagcagcctgagctcactttaatcctcactgctctggatgggggtgctcca
cgcaggtctggtatgaccgcagttcatattgaagtcgtggacataaatgataatgccccc
cagtttgtacaatcgctctatgaggtgcaggttcctgagaatatccccctcgatgcctta
gttgtcacagtctctgccacggatttagatgctgggatatatggcaatgtggcctattct
ctgtttcaaggcagtagagattctcaaccatttataatagacgaaatcaccggagaaatc
cgtctgagcaaagagctggatttcgaggtaactccatactataatgtggaaatcgcagcg
gtagatggaggggggctttcaggaaaatgcactgtggctgtacaggtgttggatgtgaat
gataacgccccagagttgaccatttccacgttctcaagccctgtccctgaaaactccccc
gagactgtagtattggtttttggggtttttgaccaagattctggggacaatggaaggatg
gtgtgttctattcagaatgaacttccatttcttttaaagtccacattcgagaactattat
actttagtgacagagaggccactggacagagagagcagagctgagtacaacatcaccatc
acggtctctgacctgggcacacccaggctcacaacccagcacaccataacagtgaaggtg
tctgacatcaacgacaatgccccctctttcacccaaacctcctacaccatgtttgtccac
gagaacaatagtcctgccctgcacataggcaccatcagtgccacagactcagactcaggc
tccaatgcccacatcacctactctctgctgccgcctgatgacccgcagctggacctcgac
tcactcatctccatcaatgctgacaacgggcagctgttcgcgctcagggcgctggactat
gaggccctgcagtcctttgagttccttgtgggcgccacagatgaaggctcgccagcgctc
agcagccaggcactggtgcacgtggtggtgctggacgacaatgacaatgtgcccttcgtg
ctctacccgctgcagaatgcctctccgccctgcacagagctactgcccagggcagcagag
cctggctatctggtcactaaggtggtggctgtggaccaggactctggccagaatgcctgg
ctgtcgttccagctgctcaaggccacagagcctgggctgttcagtgtgtgggcacacaat
ggcgaggtgcgcaccgccaggcttctgagcgagcgcgacgtgcccaagcacaagttgctg
ctactggtcaaggacaatggagagcctcagcgctctgccagtgtcactctgcacgtgctg
ctggtggatggtttctctcagccttacctgcctctgccagaggtggcgctggaccctaca
tacgatgaagataatctcacgctgtatcttgtagtcgccttggcatctgtgtcttctctc
ttcctcctgtctgtgttgctgttcgtgggcgtgaggctgtgcaggcgggccagggcttcc
tctctgggaggctactctgtgcctgagggacacttacccagccacctggtgaatgtcagc
ggtatggggacgctgtcccagagctaccagtatgaggtgtgtctgatgggggaatctggg
accacagattttaagttcctgaagcccagcattcctaacagtttgattgcagacaattaa
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