Rattus norvegicus (rat): 291759
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Entry
291759 CDS
T01003
Symbol
Dsc1
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
291759 (Dsc1)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Major cadherins
291759 (Dsc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
291759
NCBI-ProteinID:
XP_038953214
RGD:
1310768
Ensembl:
ENSRNOG00000056258
LinkDB
All DBs
Position
18:complement(11774711..11831868)
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AA seq
753 aa
AA seq
DB search
MENSLGPFPQHVQRIQSDFSQNYSIFYSISGPGVDKEPFNLFYIEKDTGDIYCTRSIDRE
EYDQFMVYGYATTADGYAPEYPLPLLFKVEDDNDNAPYFETKLTVFSVPENCRYGTSVGQ
VTAIDKDEPGTLHTRLKYKILQQIPDHPKHFTVHPDTGVITTTTPLLDREKCDTYKLVME
VRDMGGQPFGLFTTGTITISLEDENDNSPCFTQSSYFAEVDENRIDVEILRMMVQDQDLP
NTPHSKAVYKILQGNENGNFKITTDPNTNEGVLCVVKPLNYEVSRQVTLQISVLNEAQFT
NAANTQPPTMCTATVTVKIKDRDEGPECLPPVKVIQSKDGLPAGQQLLGYKAMDPETSSG
EGLRYKMVGDEDNWFEINESTGDLRTVKVLDRESKFVKNNQYNISVVAMDSVGRSCTGTL
VVLLEDFNDHPPQIDKDITICQQEKDYAVLEPVDLDGPDNGPPFQFLLDNSSSKLWTLES
QDGKRAILRQRHNLNYNYYSVPIQIQDRHGFSAKHVLSVRVCDCTIPSECRMAIEERDVK
PNVILGKWAILAMVLGSALLLCILFTCFCVTTTKRTVKKCFPDDVAQQNLIVSNTEGPGE
EVTEANIRLPTQTVNICDTSTSVGTLGGQGIKTQQNFEMVKGGYTLESNKGGGHHTLESS
KGGVLGAADTGRYAYTDWQTFTQPRLGEKVYLCGQAEEHKHCDDYVRSYNYEGKGSMAGS
VGCCSDRQEEEGLEFLDHLEPKFRTLAKTCVKK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcactgggtccatttccacagcacgttcagaggatccaatctgattttagc
cagaattattccatcttttactctatcagcggaccaggtgtggacaaagagcctttcaat
ttgttctacatcgagaaagacactggggacatctattgtacccgaagcattgaccgtgaa
gagtatgaccaatttatggtgtatggatatgcaaccactgctgatggctatgccccagag
taccctctgcctctgctcttcaaggtagaagatgacaatgacaatgccccatattttgaa
accaaactgacagtttttagtgtgcctgaaaattgtcgatacggaacttcagtgggacaa
gtgactgccatagacaaggatgagccaggaaccctacacactcgtctgaagtacaaaatc
ttgcaacaaatcccagatcaccccaagcacttcaccgtccacccagacacgggtgtgatc
actaccaccacacctttactggacagggagaaatgtgatacttacaaactagtgatggag
gtacgagacatggggggccagcccttcggtctcttcaccaccggaacgatcaccatctca
ctggaggatgagaatgacaattcaccgtgtttcacccaaagttcttattttgcagaagta
gacgaaaacagaattgatgttgagattctaaggatgatggtgcaagaccaagatttgccc
aacaccccccactcgaaggcggtatacaaaatcctacaggggaacgagaatgggaacttc
aaaatcacaacagatccaaacacaaatgaaggagtcttgtgtgttgtcaagccattgaac
tatgaagtcagccgccaagtcactctgcaaatcagcgtgcttaacgaagcccagttcact
aatgccgccaacacacaacccccaacaatgtgcaccgcaaccgtcactgtgaaaattaaa
gacagagatgagggtcctgagtgcttgccaccagtcaaagtcattcagagcaaagatggg
ctcccagctggccaacagctcctgggctacaaagcgatggacccagaaacaagcagtggc
gaaggcttaaggtataaaatggtaggagacgaagataactggtttgagattaacgaaagc
acaggagacttgagaaccgtgaaagttctagaccgagagtcgaagttcgtgaagaacaac
cagtacaatatttccgtggtggcgatggattcagttggccgatcttgcacaggaacactg
gtagtccttctggaagattttaatgaccacccaccacagattgacaaggacataaccatt
tgtcagcaggaaaaggattatgccgttttggaacccgtagatctagatgggccagataat
ggtccacctttccagttccttctggataattcttccagcaaactttggactctagagtca
caggatggtaaacgtgccattcttcggcaacgacacaatcttaattataactactattct
gtgccaatccaaatacaagacagacatggtttttctgcaaaacatgtattatcagtgcga
gtgtgtgactgtacaattccatcagaatgtagaatggccattgaggagagggatgttaaa
ccaaatgtaatccttgggaaatgggccattctcgccatggtcctgggatctgcattgcta
ctgtgcattttatttacatgcttctgtgtgactactactaagagaacagtcaagaaatgc
ttcccagatgatgtagcccagcaaaatttaattgtatcaaacaccgaaggaccaggagaa
gaagtgacggaggcaaatattagactccccacacagacagtcaacatctgtgatacaagc
acatctgttgggactcttggtggccaaggaatcaaaacacagcaaaattttgagatggtc
aaaggaggctacaccttggagtccaacaaaggaggtggccaccataccttggagtccagc
aaaggaggtgtgctaggagcagcagacactggccgatatgcttacactgactggcaaact
ttcactcaacctcggctcggcgaaaaggtgtatttgtgtggacaagctgaggaacacaag
cattgtgatgactacgttcgctcatataactatgaaggcaaaggctccatggctggttct
gtgggttgctgcagtgatcggcaggaggaagaagggctagagtttttagatcacttggaa
ccgaaatttaggacattagcaaagacatgtgtgaagaaataa
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