Rattus norvegicus (rat): 291852
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Entry
291852 CDS
T01003
Symbol
Katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rno04812
]
291852 (Katnb1)
Cytoskeleton proteins [BR:
rno04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
291852 (Katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
WDR54
eIF2A
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_LRRK2
Beta-prop_NWD2_C
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
291852
NCBI-ProteinID:
NP_001019917
RGD:
1311256
Ensembl:
ENSRNOG00000014626
UniProt:
Q4VFZ4
LinkDB
All DBs
Position
19:complement(9927249..9946750)
Genome browser
AA seq
655 aa
AA seq
DB search
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVTQDPVQASQPQTQQTPNPGVSLRRIYERPSTTCSKPQRVKHNSESERRS
PSSEDDKDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDIATAKEASKP
SPAMDVQLPVPSQEVPARPSVMTSTPAPKGEPVIIPATRNEPIGLKASDFLPAVKVPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCFKQLKSISGLVKSRSGLSGRHGSAFRELHLLMASLD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagactgcctggaagttacaagagatcgtcgcccatgcc
agcaatgtgtcctccttggtgctgggcaaggcctcggggcggctattggccactggtggg
gatgactgtcgagtcaacctgtggtccataaacaagcctaactgtatcatgagtctgaca
ggtcacacgtcccccgtggagagtgtccgcctcaacacccctgaggagctcatcgtagct
ggttcccagtcgggctccatccgcgtctgggacctggaagctgctaaaattcttcgaaca
ctcatgggccacaaagccaacatctgcagcctggatttccacccctatggcgaatttgtg
gcctcaggttcccaggacacaaacatcaagctttgggacatcaggagaaaaggctgtgtc
ttccgatatagggggcacagccaggctgtgcggtgtctccggttcagccctgatgggaag
tggctggcatcagcagcagatgaccacacagtgaagctttgggatctgacggctggcaag
atgatgtccgagttccctggtcatacagggcctgtcaacgtggtggagtttcaccccaat
gaatatctccttgcttctggcagctccgacaggacaatccgcttctgggacctggagaag
ttccaggtggtgagctgcattgaaggggagccggggcctgtgaggagtgttctcttcaac
cctgatggctgctgcctgtatagcggctgccaggactcgctgcgtgtctacggctgggag
cctgagcgctgctttgatgtggtccttgtcaactggggcaaggtggctgacctggccatc
tgcaatgaccagctgataggtgtggctttctcccagagtaatgtctcctcttatgtggtg
gacctgacaagagtcaccaggacaggaactgtgacccaggaccctgtgcaagctagccag
cctcagacacaacagacccctaaccctggtgtctcccttcgccgcatctacgagcggccc
agcacaacctgcagcaagcctcagagggtaaagcacaactcagagagtgagcggcgcagc
cccagcagtgaagatgacaaggatgagcgtgagtcgcgggccgagatccagaatgcggag
gactacaatgagatcttccagcccaagaacagcatcagtcggacaccgccccggagaagt
gagcccttcccagcgcccccagaagatgacatagccacagcaaaggaggcctcgaaaccc
agcccagccatggatgtgcagttgccggtgccaagtcaggaggtcccagcacgaccatca
gtcatgacttccactcctgcacccaagggtgagcctgtcatcatccctgccacgcggaat
gagcccattggcctaaaggcctcggacttcttgcccgccgtgaaggtcccccagcaggca
gagctggtagatgaggatgccatgtcacagatccgcaaaggccacgacactatgtgcgtg
gtgctcaccagccgccacaagaacctggacactgtgcgagctgtgtggaccacaggagat
atcaagacatcggtggactctgcagtggccatcaatgacctgtctgtggtcgtggacctt
ctgaatattgtcaaccagaaagcctccctgtggaagctggacctgtgcaccactgtgctg
ccccaaattgagaaacttctgcagagcaagtatgagagctatgtccagactgggtgtacc
tccctcaagctgatcctgcagcggttcctacccctcatcactgacattttggcagccccg
ccctctgtgggtgtggacatcagccgagaggagaggctgcataagtgtcgactctgcttc
aagcagctcaagagcatcagtggcctcgtcaagagcaggtcgggtttgagcggccgccat
ggcagtgccttccgtgagctgcacctactcatggccagtttggactga
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