Rattus norvegicus (rat): 291861 Help Entry 291861            CDS       T01003                                  Symbol Nlrc5 Name (RefSeq) protein NLRC5 isoform X1   KO K22615   NLR family CARD domain containing 5 Organism rno  Rattus norvegicus (rat) Brite KEGG Orthology (KO) [BR:rno00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:rno04054]     291861 (Nlrc5) Pattern recognition receptors [BR:rno04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    291861 (Nlrc5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Atypical_Card NACHT LRR_6 NLRC4_HD2 LRR_4 NOD2_WH AAA_16 AAA_22 AAA nSTAND3 NB-ARC Motif Other DBs NCBI-GeneID:  291861 NCBI-ProteinID:  XP_038954078 RGD:  1309166 Ensembl:  ENSRNOG00000048222 UniProt:  M0R4M1 LinkDB All DBs Position 19:complement(10483601..10587223) Genome browser AA seq 1837 aa AA seqDB search MDAESYRLGNENLWAWLVELLSKKPEWLSAKVRFFLPTLDPDCSNEAPISEVTHHQLNRL FAQGPATWESFIYTLCIELEVPLSLEVPLLSIWGQKDEFSKQLGACEESHPGPELHHGVK RPFQSYGSSPRRKHSRKQQLELVKKYLKLLRTSAQQCHGGQCPGAWNARDSPQTYIPPIV QWSGTSAPLDAQEGARIGGDPEAADSTDVSIHDLFNFKAHKGPRVTVVLGKAGMGKTTLA HRLHWRWAHGQLDRFQAVFLLEFRQLNMITQLLTLPQLLFDLYLSPESDDADAVWQYLEE NAHQILLIFDGLDEALHTDSVGTDNAGSALTLFSELCHGDLLPGCWVMTTSRPGKLPSCV PTEAAMVYMWGFDGLRVEKYVTHFFSDLLSQELALKEMRANERLRGMCAIPALCRVACFC LRCSLLSGSSPGQSSALLPTITQLYLQMVKTFSSSGTLSATSLLGLGNVALRGLVTGKVI FSVEDIPPQLMALGAVHSLLTSFCIRTRSGHKEIGYAFVHLNLQEFFAALYLMASDTVDK DTLINYVTLNSHWVLRTKAKPGLSDHLPTFLAGLASHTCHTFLCHLAQQDEAWVGSRQAT VIQVLRKLASRKLTGPKMVELYHYVAETQDLELARFVAQSLPFDLSFHNFPLTRADLASL ANILEHRDGPIHLDFDGCPLEPHCPEALVGCGQVENLSFKSRKCGDAFAEALCRSLPTMG SLKMLGLTGSKITAQGISHLIQALPLCSQLEEVSLHDNQLKDPEVLSLVDLIPCLRKLQK LDLSQNSFCMSTLLSSVKAAITCPTVRKLQVRESELIFFLSPVPETATQQSGASDAQGED SPKEGQSRNLQLRLQKCQLRVHDAKALVELFQKGPRLEEVDLSGNHLKDEGCRLVTKAVS QLHIAQKLDLSDNGLSQTGVTYLLKAVSTCGTLEELHISLLTNTVVLTFAQELRDQEGSF KRGAQLTGFMSPVTSELSQRSRRIRLTHCGFLAEHTEKLCEALRVSCQSHPLDHLDLSDN FLKDKGVILLTQLLPRLGPLKSLNLSRNDFSMDAVFSLVLCMSSLQWLFHLEVSLESDCI FLRGAGTSRDALAGGPEFPAGAQLLELSQRCTSRSFCLQECQLESLNLAYLCDALEKCPG PLEIQLSCKSLNDDSLKTLLQRLPQIPQLSQLRLTHTVLSSRSPFLLADIFNLCPWVQKV NLRSLSHAVLHFNSNEEHEAVCCGFPGCSLKQEHMETLCCALSKCKAISQLDLTDNLLDD SGLRCLLGYLPQLPISGWLDLSHNSISQEGVLYLLETLPSYPHIQEVSVSLGTKQIFRMH FSKEEGTGTILRLCECSFSTEQVSRLTSNLSHQQLTELWLTKCGLDPPQLTTLLNLVNRP AGLLDLRLEEPWVGYAGLPALMEVCAQASGCLTELSISESQEKLWLQLEFPRQEDHSEAM ALRLAHCDLGTDHGLLMRQLVETCARLQQLSLSQVSFSDDDGTRSRLLQNILISSCELKS FRLTFSNVSTESPAHLASGLEHCHHLEELDFSNNSLCKEDTELLIGALQRTCRLKRLHLS HLPLETSSLDLLVQGLSNMTLLQDLCLKHSQIGDMGTQHLAAILPRLPGLRKLDLSGNRI GPAGGMQLVKSLTHFKNLEEIILGNNTLGDPTALELAQRFPPQLRVLCLTSSHLGPEGAL CLAQALEQCPHIEEVSLAENNLAGGVPHFSKRLPLLKQINLVSCKIEDQAAKHLATNLTL CPALEKLLLSWNHLGDEMAAELAQVLPQMGQLKRVDLEKNQITACGAQLLAQGLVHGSCV PVIRLWNNPIPACVAQSLQSQEPRLDFSFFEQQPQTL NT seq 5514 nt NT seq  +upstreamnt  +downstreamnt atggacgccgagagctatcggctgggcaatgagaacctatgggcctggctggtggagctg ctgagcaaaaaaccagaatggctgagtgccaaggtcaggttcttcctccctaccctggac ccggactgcagcaatgaggcccccatctctgaggtcactcaccatcagctcaacaggctg tttgcccaaggcccggccacctgggagtctttcatctacactctgtgcatcgagcttgaa gtgcctctaagcttggaggtaccactgctgagcatctggggccaaaaggatgaattctct aagcagctaggagcgtgtgaggagagccatcctggacctgagctgcaccatggtgtcaag cgtccttttcagagctacgggtcctcaccccgcaggaagcacagcaggaagcagcagctc gagttggtcaagaagtacctgaagctcctgaggacctctgcccaacagtgccatggcggc caatgcccaggagcatggaatgctcgtgactccccacagacctacatccccccaattgtt cagtggagtgggacttcagcacccttggatgctcaagagggagccaggataggaggagac cctgaagcagcagacagcaccgatgtgagcatccatgatctcttcaacttcaaggcccac aagggacctcgagtgacagtagttctgggaaaggccgggatgggtaagaccaccctggca catcggctccactggaggtgggctcacggtcagctggaccgcttccaggccgtgttcctt ttggagttccgccagctcaacatgatcacacagttgctgacactgccccagctcctcttt gatctgtacttgagtccagagtcagacgatgcggatgccgtttggcagtacctggaagag aatgcccaccaaatcctactgatctttgacgggttggatgaggctctccacactgattcc gtgggtactgacaatgcgggctcggccctcaccctcttttctgagctctgccacggggac ctcctaccaggctgctgggtgatgactacctctcgtcctgggaaactgccttcctgcgtg cccacagaggcagccatggtgtacatgtggggctttgatgggctgcgggtggagaagtat gtcacccacttcttcagtgaccttctctctcaggaactggccttgaaagaaatgagagcc aatgaacgcctccggggtatgtgtgcaatacccgcgttgtgcagagtcgcctgcttctgc cttcgctgcagtctgctttctggaagttccccagggcagtcctcagccctcctgcccacc ataacccagttgtacctgcagatggtgaaaacttttagctccagtgggactctgtcagcc acatccttgttgggccttggaaacgtggcccttaggggactggtcactgggaaggtcatc ttctctgtggaagacatccctccccaactgatggccttgggagctgtccacagcctcctg acctccttctgtatccgtacgcgctctgggcataaagaaataggctatgcttttgtacac ctcaacctgcaggagttctttgccgctctgtatctgatggccagtgacacagtggacaaa gacacactcatcaactatgtcaccctcaattcccactgggtgctgaggaccaaagctaaa ccaggcctctcagaccatctccccaccttcctggcaggcctggcctcccacacctgccac acattcctttgtcacctggctcagcaagacgaagcctgggtgggctccaggcaggccact gtcatccaggtgctaaggaagttggccagccgaaagctcacagggccaaagatggtagaa ttgtatcactatgtggctgagacccaggatctggagctggcgaggttcgttgctcaaagc cttcctttcgatctctccttccacaatttccctctgacccgtgcagacctggctagcctg gccaacattttggagcacagggatggccccattcacctggattttgatggctgcccactg gagccccactgcccagaggctctggttggatgtgggcaggtggagaatctcagctttaaa agcagaaaatgtggggatgcctttgcagaagccctgtgcaggagcttgcctactatgggg agcctgaagatgctggggttaacaggaagtaagattacagcccaaggcatcagccacctg atacaggctttgcccctctgttcccagctggaggaggtcagtttgcatgacaaccagctc aaggacccagaggtgctgagtcttgtggacttgatcccttgcctgcggaagctccagaag cttgacctgagccaaaacagcttctgcatgtcaacccttctgtcctcggtgaaggcggcc atcacatgccccactgtcaggaagctgcaggtcagggaatcagaactcatcttttttctg tccccggtcccagagacagcaacacagcagtcaggagcatcagacgcacagggcgaagat agcccgaaggaaggacagagtcgaaacctgcaactcaggcttcagaaatgtcagctgaga gtccatgatgcaaaagcccttgtggagctcttccagaaaggcccccggctggaggaagta gatctttcagggaaccatctgaaggatgaaggctgtcgactggtgacaaaggctgtttca caacttcacattgcccagaaactggacctcagcgacaatggcctctctcagactggggtg acctatctgttgaaggccgtgagcacgtgtgggaccctggaagagctgcacatcagcctg ctaaccaacaccgtggtactcacatttgcccaggagctgagggatcaggaggggagcttc aagaggggggcacaacttaccggcttcatgtctcctgtgacctctgagttgtcccagaga tctcgaaggataaggctgacacactgtggcttcctggccgagcacacagagaagctctgt gaggcattgagagtcagctgccagagccaccccctggatcatctcgacctgtcagacaac tttttgaaggacaaaggagtgatcctactaacccagctcctcccaagactgggtcccctg aagtccttgaacctcagcaggaatgacttctccatggatgccgtgtttagcttggtcctg tgcatgtcttccctgcagtggctgttccacctagaagtcagccttgagagtgactgcatc ttccttcgaggagctgggaccagcagggatgcactagctggtggaccagaattcccagct ggagcccagttactggagttaagtcagcggtgtacctccaggagtttctgccttcaggag tgtcagctggaatccctgaaccttgcctacctctgtgacgctctggagaagtgccctggg cctctggaaatccaattgtcctgcaagtccctgaacgatgacagcctgaagaccctgctg cagcgcctgccccagatacctcagctcagccagctgcggctgacacacacagtcctgtct tcaagaagtcccttcctgctggctgacatcttcaacctgtgcccatgggttcagaaggtc aatctcaggtccctaagccatgctgttctgcactttaactccaatgaggaacatgaggct gtgtgctgtgggttcccaggatgcagcctcaaacaggagcatatggaaacactatgttgt gcactgagcaagtgcaaagccatcagccagcttgacctcacagacaacctgctggatgac agtgggctcaggtgccttctggggtacctgccacagctgcctatctctgggtggcttgac ctcagtcacaacagtatctctcaggaaggggtcctgtatctgctggagactctgccttcc taccctcatatccaagaggtctctgtgagtctgggcactaagcagatcttccgaatgcac ttctccaaagaagaaggaactggaacaatactgaggttatgtgaatgcagcttcagcaca gaacaagtatccagattgacttccaacctgagtcaccaacagttgacagagctctggctg accaagtgtggcttggacccgccacagctgaccacgctcctgaacctggtgaatcggcca gcagggttgttggacctcaggttggaagagccctgggtgggctatgccggcttaccagct ctaatggaagtctgtgcccaggcctcaggatgtctcactgagttaagcatctctgagagc caagagaagctgtggctccagctggaatttcctcgccaagaagatcattctgaggccatg gccctcaggttggctcactgtgacctgggcaccgaccacggccttctcatgagacagttg gtggagacgtgtgccagactgcagcagctgagcttgtctcaggttagcttcagtgacgat gatggcaccagatccaggctgctgcagaacatcctgatatcaagctgtgagctgaagagc ttcaggctgaccttcagcaacgtgagcacagagagccccgcccacctggcatctggtctg gaacactgccaccatctggaagagctggacttctctaacaacagcctctgtaaggaggac acagagctactgataggagcccttcagagaacctgcagactgaagaggctgcacctcagt catttgccactggaaacctcctctctggacttgcttgttcaaggattaagcaacatgacc ctgctgcaggacctttgtttgaagcacagccagattggagacatgggcactcagcactta gctgccatcttgccaaggctgccaggtctcaggaaactagacctctcagggaacaggatt ggcccggctgggggaatgcagctggtcaagtctctcacccatttcaagaacttggaggag atcatactgggcaacaacactctgggggatcccacagccctggagctggctcagagattt cccccacaactcagggtcctgtgcctgacatccagccatctgggtccagagggggccctg tgcctggcccaggccctggagcaatgcccacacatagaagaggtcagcttggcagagaat aacctagctggaggtgtcccacatttctccaagaggctcccactgcttaaacaaatcaac ctggtgtcctgcaagattgaagaccaagctgccaagcaccttgccaccaacctcacgctc tgcccagccctggaaaaactcttgctgtcctggaatcaccttggtgatgagatggctgct gagttggcccaggtcctgccacagatggggcagctgaagagagtagacttggagaagaac cagatcacagcatgtggagcccaactcctggctcaagggctggtccatggatcctgcgtc ccagtcatccgcctctggaacaaccctattcctgcctgtgtggcccagagtctgcagagc caggaacccaggctggacttctccttctttgagcagcagccccagactctttga

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