KEGG   Rattus norvegicus (rat): 291877
Entry
291877            CDS       T01003                                 
Symbol
Nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
  KO
K14397  cleavage and polyadenylation specificity factor subunit 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    291877 (Nudt21)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    291877 (Nudt21)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor Im (CFIm)
     291877 (Nudt21)
SSDB
Motif
Pfam: NUDIX_2
Other DBs
NCBI-GeneID: 291877
NCBI-ProteinID: NP_001034093
RGD: 1305766
Ensembl: ENSRNOG00000042983
UniProt: Q4KM65 B4F764
LinkDB
Position
19:10980797..10996903
AA seq 227 aa
MSVVPPNRSQTGWPRGVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtctgtggtgccgcccaatcgctcgcagacgggctggccccggggggtcaaccaattc
ggtaacaagtacatccagcaaaccaagcccctcaccctggagcgcaccattaacctgtac
ccacttaccaactatacttttggtacaaaggagcccctctatgaaaaggacagctctgtg
gcggccagatttcagcgcatgcgggaggaatttgataagattgggatgagaaggactgta
gaaggggttctgatcgtacacgagcaccgcctgccccacgtgctactgctacagctggga
acaaccttcttcaaactacctggcggtgaacttaacccaggagaagatgaagttgaagga
ctaaaacgcttaatgacagagatactgggtcgtcaagatggagtcctgcaagactgggtc
atcgatgactgcattgggaactggtggagaccaaattttgaacctcctcagtacccgtat
attcctgcacatataacaaagcccaaggaacataagaagttgtttctggttcagcttcaa
gagaaagccttgtttgcggtccctaagaattacaagctggtagctgcaccgttgtttgaa
ctgtacgacaatgctccgggatacggacccatcatttctagtcttcctcagctgctgagc
aggtttaattttatatacaactga

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