Rattus norvegicus (rat): 292023
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Entry
292023 CDS
T01003
Symbol
Aars1
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
292023 (Aars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rno01007
]
292023 (Aars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rno03016
]
292023 (Aars1)
Enzymes [BR:
rno01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
292023 (Aars1)
Amino acid related enzymes [BR:
rno01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
292023 (Aars1)
Transfer RNA biogenesis [BR:
rno03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
292023 (Aars1)
Prokaryotic type
292023 (Aars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
292023
NCBI-ProteinID:
NP_001093987
RGD:
1304832
Ensembl:
ENSRNOG00000018404
UniProt:
P50475
LinkDB
All DBs
Position
19:55906694..55930499
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AA seq
968 aa
AA seq
DB search
MDSTLTAREIRERFINYFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTVDPS
HPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALE
LLTQEFGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEAKILPGNMKDNFWEMGD
TGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDTDGIDMAYRVLAD
HARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDA
FPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCQTIPGDTAWLLYDTYGF
PVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELRAKGLEA
TDDSPKYNYHSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGG
QIFDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLRVGDQVRLFIDEPRRRP
VMSNHTATHILNFALRSVLGDADQKGSLVAPDRLRFDFTAKGAMSTEQIKKTEEIVNGMI
EAAKPVYTLDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSV
EFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEVK
VKAQSAPNKDVQKEIADLGEVLATAVIPQWQKDEQRETLKSLKKVMDDLDRASKADVQKR
VLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDNEAGKIT
CLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDMSAQATGKNVGCLQEALQLATSFAQ
LRLGDVKN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggactccactctaacagcacgagagatccgagagcggtttataaattatttcaaacga
aatgagcacacctatgtccactcctccgccaccatccctctggacgaccccaccttgctc
ttcgccaacgcaggcatgaaccagttcaaacccatcttcctaaacacagtagacccttct
caccccatggcaaagctgagcagagctgccaatacccagaagtgcatccgagccgggggc
aaacacaatgacctggatgacgtgggcaaagatgtctaccaccacaccttctttgagatg
ctgggctcctggtcttttggggactattttaaggaattggcatgtaagatggctctggaa
cttcttacccaggagtttggtattccagttgaaagactctatgttacttactttggtggg
gatgaggcagccggcctagagccagatctggagtgtagacagatctggcaaaatttagga
ctggatgaagccaaaattctccctggcaacatgaaggacaacttctgggagatgggtgac
acgggcccctgtggtccctgcagtgagatccactatgaccgcattggtggcagggacgct
gcacaccttgtcaaccaggatgaccccaatgtgctagagatctggaatctcgtgttcatc
caatataacagggaatctgatggtgttctgaaacctctccccaagaaaagcattgacaca
gggatgggcctggagagattggtgtctgtgctgcagaacaagatgtccaactatgacact
gaccttttcgttccttacttcgaagccattcagaagggtacaggcgcccggccgtatact
gggaaggttggtgctgaggacactgatggaattgacatggcctacagggttctggctgac
cacgcccggaccatcactgtggcgctggctgatggcgggcgacctgacaacacaggtcgg
gggtatgtgctgagacggatccttcgccgagctgttcgctattcccacgagaaactgaac
gccagcaggggtttcttcgccacattagttgatgttgtcgttcaatccctgggagacgcc
tttcctgagctgaagaaggacccagatatggtgaaggacatcattaatgaagaagaggta
cagtttctcaagactctcagcagagggcggcgcatcctggaccggaaaattcagagctta
ggagactgccaaaccatcccaggtgataccgcttggctcctctatgatacttacggattc
ccagtggatctcactggattgattgctgaagagaagggcctggtggtagatatggatggc
tttgaagaagagaggaaactggcccagctgaagtcacagggcaagggggcagggggcgaa
gacctcatcatgctggacatttatgcgattgaagaactccgggcaaagggtttggaggcc
acagatgattctccaaagtataactaccattcagactccagtggtagctatgtgtttgaa
tgtacagtggctaccgtgcttgctctgcgtagggaaaagatgtttgtggacgaggtggtc
actggccaggagtgcggagtggtgctggacaagacctgtttctatgccgagcaaggaggg
cagatcttcgatgaaggctacttggtgaaggtcgacgacagcagtgaggataaaactgag
tttacagtgaagaatgctcaggtccgaggcgggtatgtgctgcacataggaacaatatat
ggtaacctgagagtgggggatcaagtccggctgttcattgacgagccccgacgaagacct
gtcatgagcaaccatacagctacacacatcctgaacttcgccttgcgctcggtgcttggg
gatgcagaccagaaaggttcactggttgctcctgaccgccttcggtttgacttcactgcc
aagggagccatgtccacggagcaaatcaagaagactgaggagattgtcaatggcatgatt
gaggcagctaagcctgtctacaccctggattgtcccctggctgcagcaaaagccatccag
ggccttcgagctgtatttgatgagacctatcctgaccctgtgcgagttgtctccattgga
gtcccagtgtcagaactgctagatgacccctccgggcctgccggctcccttacttctgtt
gagttttgtggaggaacacatctacggaattctagccatgcaggagctttcgtgatagtg
actgaagaagccattgccaagggtatccgcaggattgttgctgtcacaggtgctgaagcc
cagaaggccctcaggaagtcagaaaccttgaagaaatctctctcggccatggaggtcaaa
gtgaaggcccagtctgcacccaacaaggatgtgcagaaggaaattgctgaccttggtgag
gtcctggccactgcagtcattccccagtggcagaaagatgaacaacgggagactttgaaa
tccctgaagaaagtcatggatgacctagaccgggccagcaaagccgatgtccagaagcga
gtgttagagaagactaagcagctgattgacagcaaccccaaccagcctctggtcatcctg
gagatggagagcggtgcatcggccaaggccctgaatgaagctttgaagcttttcaagaca
cattctcctcagacatctgcaatgctcttcacagtagacaatgaggctggcaagatcaca
tgcttgtgtcaggttcctcagaatgcagccaaccgggggctaaaagccagcgagtgggtc
cagcaggtttcaggcctgatggatggtaaaggtggtgggaaggacatgtctgcccaggcc
acaggcaagaacgtgggctgccttcaggaagcactgcagctggctacttcctttgcccag
ctccgtctcggagatgtaaagaactga
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