Rattus norvegicus (rat): 292028
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Entry
292028 CDS
T01003
Symbol
Kars1
Name
(RefSeq) lysine--tRNA ligase isoform 1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
292028 (Kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rno01007
]
292028 (Kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rno03016
]
292028 (Kars1)
Enzymes [BR:
rno01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
292028 (Kars1)
Amino acid related enzymes [BR:
rno01007
]
Aminoacyl-tRNA synthetase
Class II (A)
292028 (Kars1)
Transfer RNA biogenesis [BR:
rno03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
292028 (Kars1)
Prokaryotic type
Other AARSs
292028 (Kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
292028
NCBI-ProteinID:
NP_001006968
RGD:
1359653
Ensembl:
ENSRNOG00000019456
UniProt:
Q5XIM7
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All DBs
Position
19:complement(56867096..56886151)
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AA seq
626 aa
AA seq
DB search
MLMQAAVRLVRGSLRQTSWAEWGQRELRLGQLAPFTTLRKDKPLSDRRSELKRRLKAEKK
LAEKEAKQKELSEKQLNQTTAAAATNHTADNGVGAEEETLDPNQYYKIRSQAVQQLKVSG
EDPYPHKFHVDISLTQFIQEYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEG
VKLQVMANSRNYKSEEEFVHINNKLRRGDIIGVEGNPGKTKKGELSIVPREMTLLSPCLH
MLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMM
NIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTH
NPEFTTCEFYMAYADYHDLMEITEKMLSGMVRSITGSYKITYHPDGPEGQAYEIDFTPPF
RRISMVEELEKVLGVKLPETSLFETEETRKILDDICVARAVECPPPRTTARLLDKLVGEF
LEVTCISPTFICDHPQIMSPLAKWHRCKEGLTERFELFVMKKEICNAYTELNDPVRQRQL
FEEQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFP
AMKPEDKKETATATETPESTEASPSV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcaagctgctgtcaggcttgttagggggtccctgcgccaaacctcatgggca
gaatggggtcagagggaacttcgactgggccaacttgctcctttcacaacgctccgcaag
gacaagccactttctgatagaagaagtgagctgaagaggcgtctgaaagctgagaagaag
ctggcagagaaagaggccaagcagaaagagctcagtgaaaagcagctaaaccagacgact
gctgctgctgccaccaaccatactgctgacaatggtgtgggtgctgaagaggagaccctg
gacccaaaccaatactacaagatccgtagtcaagctgtccagcagctgaaggtcagtggg
gaggacccgtacccacacaagttccatgtggacatctcactcactcagttcatccaagaa
tacagtcacctgcagcctggggaccacctgactgacatcaccttaaaagtagcaggtcgc
atccacgccaagagagcctctgggggaaagctcatcttctatgaccttcgaggagagggg
gtcaagttacaagtcatggccaactccaggaattataaatcagaggaagaattcgttcac
atcaataacaaactgcgcaggggagacataatcggagtcgagggcaatcccggaaaaacc
aagaagggtgagctgagcatcgtcccccgggagatgacactcctgtccccctgcttgcac
atgctgcctcatcttcacttcggcctcaaggacaaggaaacaaggtatcgtcagagatac
ttggacttgatactgaacgactttgtgaggcagaagtttatcatccgctctaagatcatc
acatatataagaagtttcttggacgagctgggattcctagagatcgagactcccatgatg
aacatcatccccgggggagctgtggccaagcctttcatcacctaccacaacgagctggac
atgaacctgtacatgagaattgctccagagctctaccacaagatgctggtggttggtggc
attgaccgggtttatgaaattgggcgccagttccggaacgaagggattgatttgactcac
aatcctgagttcaccacctgtgagttctacatggcctatgcagactatcatgacctcatg
gaaatcacagagaagatgctgtcagggatggtgagaagcatcacaggcagttacaagatc
acctatcacccagatgggccagaaggccaagcctatgagattgacttcaccccacccttc
cgaagaatcagcatggtagaagagcttgagaaggttctgggcgtgaagctgccagaaacc
agtctctttgagaccgaagaaactcgcaaaattctcgatgatatttgtgttgcaagggct
gttgaatgccccccacctcggaccacagccaggctccttgataagcttgtgggagagttc
ctcgaagtgacatgcatcagccctacattcatctgtgatcacccacagatcatgagtcct
ctggccaaatggcaccgttgcaaagagggtctaactgagcgcttcgagctgtttgtcatg
aagaaggaaatatgcaatgcgtacactgagctgaacgaccccgtgcggcagagacaactg
tttgaagaacaggccaaggccaaggctgctggtgacgatgaggccatgttcatagatgag
aacttctgtactgccctggagtacgggctgcccccaacagctggctggggcatgggtatc
gaccgagtcaccatgtttctcacagactccaacaatatcaaggaagtacttctctttcct
gccatgaagcctgaagacaagaaggaaactgcaacagccaccgagaccccagaaagcaca
gaggccagcccctctgtctag
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