Rattus norvegicus (rat): 29220
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Entry
29220 CDS
T01003
Symbol
Thbs4
Name
(RefSeq) thrombospondin-4 precursor
KO
K04659
thrombospondin 2/3/4/5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04145
Phagosome
rno04151
PI3K-Akt signaling pathway
rno04510
Focal adhesion
rno04512
ECM-receptor interaction
rno04820
Cytoskeleton in muscle cells
rno05144
Malaria
rno05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
29220 (Thbs4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
29220 (Thbs4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
29220 (Thbs4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
29220 (Thbs4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
29220 (Thbs4)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
29220 (Thbs4)
09174 Infectious disease: parasitic
05144 Malaria
29220 (Thbs4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
29220 (Thbs4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
29220 (Thbs4)
00536 Glycosaminoglycan binding proteins [BR:
rno00536
]
29220 (Thbs4)
Membrane trafficking [BR:
rno04131
]
Endocytosis
Phagocytosis
Opsonins
29220 (Thbs4)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
29220 (Thbs4)
Exosomal proteins of colorectal cancer cells
29220 (Thbs4)
Exosomal proteins of bladder cancer cells
29220 (Thbs4)
Glycosaminoglycan binding proteins [BR:
rno00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
29220 (Thbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_3
EGF
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
29220
NCBI-ProteinID:
NP_058829
RGD:
62046
Ensembl:
ENSRNOG00000012471
UniProt:
A0A0G2K7L8
LinkDB
All DBs
Position
2:complement(25718219..25760345)
Genome browser
AA seq
961 aa
AA seq
DB search
MLAPRAAAFLLLHLVLQPWQRAGAQATPQVFDLLPSSSQRLNPAALQPVLTDPTLHELYV
ISTFKLQSKSSATIFGLYSSSDNSKYFEFTVMGRLNKAILRYLKDDGKIHLVVFNNLQLA
DGRRHRILLRLSNLQRGAGSVELYLDCVQVDSVNNLPRAFSGLTQNPQAIELRTFQRKPQ
DFLEELKLVVRGSLFQVASLQDCFLQQSEPLAATGTGDFNRQFLGQMTQLNQLLGEVKDL
LRQQVKETSFLRNTIAECQACGPLSFQSPTPNTLVPIAPPAPPTRPTRRCDSSPCFRGVR
CTDTRDGFQCGPCPDGYTGNGITCSDVDECKYHPCYPGVRCTNLAPGFRCDACPVGFTGP
MVQGVGINFAKTNKQVCTDVDECRNGACVLNSICINTLGSYRCGPCKPGYTGDQTRGCRT
ERSCRNPEQNPCSVHAQCIEERQGDVTCVCGVGWAGDGYVCGKDVDIDSYPDEELPCSAR
NCKKDNCKYVPNSGQEDADRDGIGDACDEDADGDGILNEQDNCVLTHNVDQRNTDKDIFG
DACDNCRGVLNNDQKDTDGDGKGDACDDDMDGDGIKNILDNCPRVPNRDQQDRDGDGVGD
ACDSCPDVSNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSAQLDTDKDGIG
DECDDDDDNDGIPDLVPPGPDNCRLVPNPAQEDSNNDGVGDICEADFDQDKVIDRIDVCP
ENAEITLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVD
FEGTFHVNTQTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVK
SKTGPGEHLRNSLWHTGDTSDQVRLLWKDSRNVGWKDKVSYRWFLQHRPQVGYIRVRFYE
GSELVADSGVTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQIQTFDRLD
N
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctagccccacgcgcggccgccttcctcctactgcacctggtcctgcagccgtggcag
cgggcgggcgcccaggccacaccccaggtctttgaccttctgccatcctccagccagagg
ctgaacccggccgccctgcagccagtcctgacagaccccaccctgcacgagctctatgtc
atctccaccttcaagctgcagagtaagagctcagccaccatctttggcctctactcctcg
agtgacaacagcaaatactttgaattcactgtgatgggacgcctgaacaaagccatcctc
cgttacctaaaggatgatgggaagattcatctggtggttttcaacaacctgcagctggcg
gatgggaggcgccaccggattctcctgagactcagcaatttgcagagaggggccggctcc
gtagaactctacttggactgtgtccaggttgattcagtgaacaacctccccagagccttc
tctggtctcacccagaacccacaggccattgaattgagaacattccagaggaagccccag
gacttcttggaagagctgaagctggtggtgaggggctctctgttccaggtggccagccta
caagactgtttcctgcagcagagtgagccgctggctgccacaggcacaggagactttaat
cgacagtttttgggtcaaatgacacaattaaaccagctccttggagaggtgaaagatctt
ctgaggcagcaggtcaaggaaacatcatttttgcgaaacactattgctgagtgccaggct
tgtggccctctcagcttccagtccccaaccccaaacacgctggtgcccatagctcctcca
gcacccccaacccgaccaacacgtcgctgtgactccagcccttgtttccgaggtgtccga
tgcacggacaccagggacggcttccaatgtggaccctgcccagatggctacacggggaac
gggatcacctgttctgacgtggatgagtgtaaataccatccctgctaccctggtgtgcgc
tgcacaaatttggctccgggtttcagatgtgatgcctgtccagtaggcttcacggggccc
atggtgcagggcgtggggatcaactttgccaaaacaaacaagcaggtgtgcactgatgtt
gacgagtgtcggaacggagcgtgtgttctgaactccatctgcattaacactctgggctct
taccgctgtgggccttgcaagccagggtacactggtgaccagacgaggggatgcaggacc
gaaaggagctgccggaacccagagcagaacccgtgcagtgtgcatgcgcagtgcattgag
gaacggcaaggggatgtgacgtgtgtgtgcggtgttggttgggccggcgacggctatgtc
tgtggaaaggatgtggacatcgacagttaccccgatgaagaactgccgtgctcagccagg
aactgcaagaaggataactgcaagtatgtgccaaactccggccaagaagacgcagacaga
gatggcattggagacgcctgtgatgaggatgcggatggagacgggatcttgaatgagcag
gacaactgtgtcctgactcacaatgtggaccagaggaacactgataaagatatctttggg
gatgcctgtgacaactgccggggcgtcctgaataatgaccagaaggacactgacggggat
gggaaaggagacgcctgtgatgacgacatggatggagacggaataaaaaacattttggac
aactgtccccgagttcccaaccgcgaccaacaggatcgggatggcgatggtgtcggagac
gcctgtgacagctgtcctgatgtcagtaaccctaaccagtcggatgtggataacgatctg
gttggggactcctgtgacaccaaccaagacagtgatggggatggccaccaggacagcaca
gacaactgccccaccgtcattaacagcgcccagctggacaccgacaaggacgggattggc
gatgaatgcgatgacgatgacgataatgacggcatcccagacctggttccccctggccca
gacaactgcaggcttgttcccaacccagcccaggaagatagcaacaatgatggagtagga
gatatctgtgaagctgacttcgaccaggacaaggtcattgatcgcattgatgtgtgtcct
gagaatgcggagatcaccctgactgacttcagggcctatcagactgtggtcctggaccct
gaaggggatgcccagatcgaccccaactgggtggtcctgaaccagggcatggagattgtg
cagaccatgaacagtgaccctggcctagcagtcgggtacacggcatttaatggagttgac
tttgaagggaccttccacgtaaacacccagacagatgacgactatgccggctttattttt
ggttaccaagacagttccagcttctatgtggtcatgtggaaacagacagagcagacatac
tggcaggctacgccattccgtgcagtagcagaacctggtattcagctcaaggccgtgaag
tctaaaactggcccaggggaacatctccgaaactccctgtggcacacaggggacaccagc
gaccaggtcaggctgctgtggaaggactccaggaatgtgggctggaaggacaaggtgtcc
taccgctggttcctgcagcataggccccaggtgggctacatcagggtgcggttttatgaa
ggctcagagttggtggctgactccggggtcactatagacaccaccatgcgcggaggccga
ctgggcgtgttctgcttctctcaggaaaacatcatctggtccaacctcaagtaccgctgt
aacgacaccataccagaggacttccaggagttccagatccagacctttgaccgcctggat
aattaa
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