KEGG   Rattus norvegicus (rat): 29231
Entry
29231             CDS       T01003                                 
Symbol
Ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    29231 (Ciao1)
   03400 DNA repair and recombination proteins [BR:rno03400]
    29231 (Ciao1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    29231 (Ciao1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     29231 (Ciao1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_Vps41 WDR90_beta-prop_4th NBCH_WD40 eIF2A Beta-prop_ELP1_1st WD40_RFWD3 PROPPIN B-prop_COPA_B_2nd Beta-prop_HPS5 MIOS_WD40 Beta-prop_SPT8 RMC1_N Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 29231
NCBI-ProteinID: NP_001008766
RGD: 1307285
Ensembl: ENSRNOG00000012638
UniProt: Q5M7T1 A6HQ07
LinkDB
Position
3:complement(134913639..134919244)
AA seq 339 aa
MKDALVLQSRVPAHPDSRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGH
QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL
ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE
GDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPS
WKCVCTLSGFHTRTIYDVAWCQLTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQ
AHSQDVNCVAWNPKEAGLLASCSDDGEVAFWEYHQPAGL
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaaggatgcgctggtactgcagagccgcgtcccggcgcacccggattcccgctgctgg
ttcctggcctggaaccccacgggaaccttgttggcctcatgcggaggcgaccgtaaaatt
cgcatctggggcaccgagggtgacagctggatttgcaagtctgtcctttctgaaggccat
cagcgcaccgttaggaaagtggcctggtccccctgtggaaattacctggcatctgccagc
tttgatgctactacttgcatttggaagaagaaccaggatgactttgagtgtgtgaccact
cttgagggtcatgagaatgaggtcaagtcagtggcttgggccccatctggcaacctcttg
gctacctgcagcagagataagagcgtgtgggtctgggaagttgatgaagaagatgagtat
gaatgcgtcagtgtcctcaattctcacacacaggatgttaagcatgtggtttggcaccca
agccaggagcttttagcttctgctagctatgatgacacagtgaagctataccaggaagaa
ggggatgactgggtctgctgtgctacccttgaaggtcacgagtccactgtatggagcata
gcctttgatcccagcggccagcgtctggcatcttgcagtgatgaccgaactgtgcgcatc
tggcgccagtatctacctggcaatgaacaaggggtggcatgcagtggctccgaccccagc
tggaaatgtgtttgcactttgtcgggcttccataccaggaccatctacgacgttgcttgg
tgtcagctgacaggggccctggctacagcttgtggagatgatgccatccgagtgtttgag
gaagatccaggctcagacccacagcagcccaccttctctttgacagcccatcttcgtcag
gcccattcccaggatgtcaactgtgtggcttggaaccccaaggaggcagggctcctggcc
tcttgtagtgatgatggggaggtagccttctgggagtatcatcagcctgcaggtctctga

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