Rattus norvegicus (rat): 292534
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Entry
292534 CDS
T01003
Symbol
Tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rno03016
]
292534 (Tsen34)
Enzymes [BR:
rno01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
292534 (Tsen34)
Transfer RNA biogenesis [BR:
rno03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
292534 (Tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
TSEN34_N
Motif
Other DBs
NCBI-GeneID:
292534
NCBI-ProteinID:
NP_001006969
RGD:
1359564
Ensembl:
ENSRNOG00000059572
UniProt:
A0A0G2K071
Q5XIB7
LinkDB
All DBs
Position
1:complement(74432687..74440553)
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AA seq
312 aa
AA seq
DB search
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLLPEEARLL
AEIGAVTLVSAPRPDPRNHGLALASFKRQQEQSFQDQSTLAAEARETRRQELLEKIVEGQ
AAKKQKLEQDSGADEEGQEAGGSEATQGSETSDDGQASAEQEGADSSSPQPGPSNGVTPL
PRSALLIQLATARPRPVKAKPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAG
KFGGDFLVYPGDPLRFHAHYIAQCWSAEDPIPLQDLVSAGRLGTSVRKTLLLCSPQPDGK
VVYTSLQWASLQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtggaggtcgctaatggccgctcgctggtatggggagccgaggcggtgcag
gcgctgcgggagcgcctgggagtcgggggacgcacggtgggcgccctgccccgcgggccc
cgccagaactcgcgcctgggccttccgcttctgctgctgcctgaagaagcccggctcctg
gcggagataggcgctgtgaccttagtcagcgccccgcgtccggatccccgcaaccatggc
ttggccctagcgtcgttcaaacgccagcaagagcagagtttccaggatcagagcactttg
gcagcagaggcccgggagacccggcgtcaggagcttctggagaagatcgtagaaggccag
gctgccaagaagcagaagctggaacaggattctggggcagatgaagaaggccaagaagcc
ggtggaagtgaagctacccaaggaagtgagaccagtgatgatggtcaggcttctgcggag
caggaaggagcagattcttcatccccccaaccaggaccttcaaatggggtgactcccttg
cccagatcagccctgcttatccagctggccactgccaggcctcggcctgtaaaagctaag
cctctggactggcgtgtgcagtccaaagactggccccatgctggccgtcctgctcatgag
cttcgctacagcatctacagagacctgtgggagagaggcttcttcctcagcgcagctggg
aagtttggtggtgacttcctggtctatcctggtgatccgctgcgtttccatgctcactac
attgctcagtgctggtctgctgaggaccccatcccacttcaggacctggtctctgcaggc
cgcctgggaaccagtgtcagaaagactctgcttctctgctcccctcagcctgatgggaag
gtggtttatacttccctgcagtgggccagcctgcagtga
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