Rattus norvegicus (rat): 293057
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Entry
293057 CDS
T01003
Symbol
Whamm
Name
(RefSeq) WASP homolog-associated protein with actin, membranes and microtubules
KO
K20479
WASP homolog-associated protein with actin, membranes and microtubules
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
293057 (Whamm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
293057 (Whamm)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
293057 (Whamm)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
293057 (Whamm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
ZnuA
PhaP_Bmeg
Spem1
Motif
Other DBs
NCBI-GeneID:
293057
NCBI-ProteinID:
NP_001124200
RGD:
1563506
Ensembl:
ENSRNOG00000028113
UniProt:
A6JCG9
D3ZKN4
LinkDB
All DBs
Position
1:144935588..144963989
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AA seq
797 aa
AA seq
DB search
MDSEQPDSLEGWVPLREDLFPEPERHQLRFLVAWNAAEGQFAVTCHDRTAQRRRRGRQEA
GDGGCSWAGALSAAGFRGAHRQLAALWPALERCFPPLPPELDAASGAGWGLGRGLWALVW
ALVWPAPANPGDAALQDLCRQLEHYLGLAADGCGGATVRDVLFPAPGDSADCEGLSEFRE
RMLRARLDQTVARLRQLLQDHRKANTMVTLMKVYQEEDEVYQELVTMATTFFQYLLQPFR
DMREVATSCKLGILKSLEEDELGPKRVAALQKEASEWTRRAEEAVVSIQDITVNYFKETV
TALTGMQKQMEQDQRRFGQAAWATAMPRLENLKLMLARETLQLMRAKELCLKHRQAEIQR
KVEDLPDQGKNVGVVDELEIQYYETQLELYDVKLEILRNEETILVTRLDSVKRLIAEKQA
EVVYYDPCESPEELKSLAPDLELHLGDNRELRALSQQCQQLEAQRGRICSRRAQLRNRKD
HCRENHQLRLQQAKQNVRHFHHHHSIQMKRDKIKEEEQKKKEWIDHERQKTLERLRAYRE
KGPAPRSALKTSCSESMLSNLSGGCSQKRLSTAQHKTAAHPASSKTRSASPLPEATVKPP
EHQDPCGSAPGLALAPVSDQTLSGSSEEMSLAPPPPPPPPPPLPPPPLLPPSALPSFQGT
THQNIGFQTLATEDQPFPLACDMSARRPGGSDCQEGFQRPGSMDEVLASLRQGRTSLRKV
EMTTRPPPRTSVNEQVLAAIRQGVQLKKVHTGPNVDPSKKSTSDLERSIREALERIKKVS
ADSEEDNDEQSPVEWDR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagcagcccgacagcctggagggctgggtgccgctgcgcgaggacctcttc
ccggagcccgagcgccatcagctgcgtttcctggtggcctggaacgccgccgagggccag
ttcgccgtcacctgtcacgaccgcacggcgcagcggcgccggcgcgggcgacaggaggcc
ggcgacgggggctgcagctgggccggggcgctgtcggcggccgggttccgcggcgcgcac
cggcagctggcggcgctgtggccggccctggagcgctgctttccgccgctgccgccggag
ctggacgcggcgagcggcgcgggctggggcctggggcgcgggctgtgggcgctcgtgtgg
gcgctcgtgtggccggcgcctgcgaaccctggcgacgcggcgctgcaggacctgtgccga
cagctggagcactacctgggcctggcggccgacggctgcggcggcgccaccgtgcgcgac
gtgctcttcccggccccgggtgactcggcagactgcgagggcctgagcgagttccgcgag
aggatgctgcgcgcgcgcctggaccagacggtcgcgcgactgcgccagcttcttcaagat
cacagaaaagccaacaccatggtaacattaatgaaagtttatcaagaggaagatgaagtc
tatcaagaactagttaccatggcaaccacattcttccagtatttactacagccatttaga
gacatgcgagaagttgcaacctcatgtaagcttggtattttgaagtccctggaagaggat
gagctgggtcctaaaagggtggctgccctacagaaggaagccagtgagtggaccagacgg
gctgaagaagcagtggtctctatccaggacatcactgtgaattattttaaggaaacagta
acagcattaacaggaatgcagaagcaaatggagcaggatcagaggagatttggccaggct
gcctgggccacagccatgcccaggctagaaaacctcaagctcatgttagctcgggagact
ctgcagcttatgagagccaaagagctgtgtctaaaacacagacaggctgaaatccagagg
aaggtggaagatcttccagaccaaggaaagaatgtaggtgttgtggatgagctagaaatc
cagtattacgagacgcagttggagttatatgatgttaagcttgagatactgaggaatgag
gagacgatccttgtcacacggttggactctgttaagagacttatagcagagaaacaagct
gaagtggtctactacgacccatgtgaaagccctgaggagctgaagagcctggctcctgac
ctggagctgcaccttggtgacaacagagagctgagagcactcagtcagcagtgccagcag
ctggaggctcagcggggccgcatctgctccaggagagcccaactcaggaacagaaaggat
cactgccgagaaaatcatcagcttagactgcaacaggccaaacaaaacgtgagacatttt
caccaccatcacagcatccagatgaaaagagacaaaataaaagaagaggaacaaaagaaa
aaagaatggatagaccatgaacgccagaaaacactggagcggctaagagcatatagggag
aagggtccagctcctcggtctgcactgaaaacgagttgctcagaatccatgctgtcaaac
ctgtcaggtggatgctctcagaagaggctctcaacagctcagcacaagaccgcagctcat
cctgcctccagcaaaaccagaagtgcttctcccttacctgaagccactgtgaaaccccct
gagcatcaagatccctgtggcagtgcccctggcctggcccttgctcctgttagtgaccag
acgctctctggatccagtgaagagatgtcactagcaccaccgccaccacctcccccccct
ccgccacttcctcctccaccacttcttcctccctctgctttgccctcttttcaaggtacc
actcatcagaatatagggttccagactctggcaacagaggaccagccgttccctctagcc
tgtgatatgtctgccagaagaccaggagggtctgattgccaggagggtttccagcgtcca
ggctctatggatgaagtgttggcctctctccggcagggcaggacctctctccggaaagta
gaaatgaccacccggccccctccccgcacctcggtcaatgaacaagttctggctgccatc
aggcagggggtgcagctgaagaaagtccacacaggccccaatgtggaccccagcaagaag
agcaccagcgacctggagaggagcatcagagaagccctggagagaatcaagaaagtgtct
gctgactcagaggaggacaatgatgaacagagccctgtcgagtgggaccgctag
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