Rattus norvegicus (rat): 293184
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Entry
293184 CDS
T01003
Symbol
Ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rno03021
]
293184 (Ctr9)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
293184 (Ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_5th
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
293184
NCBI-ProteinID:
NP_001094131
RGD:
1311097
Ensembl:
ENSRNOG00000017195
UniProt:
G3V897
A6I832
LinkDB
All DBs
Position
1:174571952..174601974
Genome browser
AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKKRKGSGSEQEGEEEEGGERKKKRR
RRPPKGEEGSDDDETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSNSDSDDDERPNRRASSESDSDDNQNKSGSEAGSPRRSGRQESD
EDSDSDQPSRKRRRSGSEQSDNESAQSGRSPSGGSENENDSRPVSPSAESDHESEQGSDN
EGSGQGSGNESEPEGSNNEASDRGSEHGSDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggttccatcgagattcccctccgggatactgacgaggtcattgaacttgac
ttcgatcagttaccggagggggatgaagttatcagtattctgaagcaggagcacacacaa
ctgcacatatggattgctttggcgctggagtactacaagcaagggaaaacagaagagttt
gtgaagctgctggaggctgcacggatagatggcaatttggactatcgagaccacgagaaa
gaccagatgacttgcttggatacattggcagcctactatgtacaacaggctcggaaagaa
aagaacaaagacaataagaaagaccttattacgcaggcaactttgttgtatacaatggct
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcctgctc
gagggtgacaaaatggaccaagctgacgcacagtttcattttgtacttaaccagtctcca
aacaatattccagcccttcttgggaaagcttgtatctcattcaacaagaaggactacaga
ggagcccttgcttactataaaaaagcattgcgcactaacccaggatgtccagctgaagtt
cgtctaggaatgggccattgctttgtcaaactgaacaaactggaaaaagcccgactagca
ttcagcagagccctggaactcaactctaagtgtgtgggagcactggtcggactggctgtt
ctagaactcaacaataaagaggctgattccatcaaaaatggtgtgcagcttctttccaga
gcctacactattgatcctagcaaccctatggtactgaaccatttggcaaaccactttttc
ttcaagaaggattatagtaaagtgcagcacctggctctccacgcgttccacaacacagag
gtggaggccatgcaagcagagagctgttaccagctggctcggtccttccatgttcaggaa
gattatgaccaggcctttcagtactactatcaagccacacagtttgcttcatcttctttt
gtcctaccattttttggtttgggacaaatgtatatttatcgaggtgacaaagaaaatgca
tctcagtgtttcgagaaagttttgaaagcttatccgaacaattatgaaactatgaaaatt
cttggctctctctatgctgcttcagaagatcaggagaaaagagacatagccaagggccat
ttgaagaaggttacagaacagtatcctgatgacgtggaagcttggattgagttggcccag
atcttagaacagactgacatacagggtgccctttcagcctatggaacggcaacacgaatc
ctgcaggagaaggtgcaggccgatgtcccgcctgagattttgaataatgttggggccctc
cattttagacttggaaacctaggcgaagcaaagaagtacttcctggcctcactggaccga
gcaaaggcagaggcggagcatgatgaacactattacaatgccatctctgtcaccacatcc
tacaatttagccaggctctacgaggccatgtgtgaatttcatgaagcagagaaactgtac
aaaaacattttacgagagcatcctaactatgttgattgctatctgcgcctaggagccatg
gccagagataaaggaaacttctatgaagcttcagattggtttaaggaagcccttcagatc
aatcaggaccatcccgatgcctggtctttgattggtaacctccatctggcaaaacaagag
tggggcccaggtcagaagaagtttgagaggatcttaaaacagccagccacacagagtgac
acctactctatgctggcccttggcaatgtgtggctccagactttgcatcagccaacccga
gaccgagaaaaggaaaagcgccatcaagaccgtgcgctggccatctacaaacaagtcctg
agaaatgatgccaagaacctgtatgctgccaatggcataggagctgtcttggcccacaaa
ggatatttccgtgaagctcgtgatgtgttcgcccaagtgagagaagcaacagcagatatc
agtgacgtgtggctgaacttagcacacatctacgtcgagcagaagcagtatatcagcgcc
gttcagatgtatgagaactgcctccgaaagttctataagcaccaaaacactgaagttgtg
ctctacctggcccgtgccctcttcaagtgtggcaagttgcaggagtgcaagcagactctg
ctgaaggcccgacacgtggcacccagcgacacagttctgatgtttaatgtggccttggtc
ttgcaaagattagctacctctgtcctgaaagatgaaaaaagtaatttgaaggaagtcctt
aatgctgtgaaagagctggagcttgcacacagatacttcagttacttgagtaaagttgga
gataagatgagatttgatttggcccttgctgcctctgaagccaggcagtgctctgactta
ctgagccaggcccaataccatgtggctcgggcacgcaagcaggatgaggaggaacgggag
ctgcgggccaagcaggagcaggagaaggagctcctaagacagaagcttctcaaagagcag
gaagaaaaacgtctcagagaaaaggaagagcaaaagaaacttttggaacagcgggcccag
tatgtggagaagaccaaaaatatcctcatgttcactggcgagactgaagcaacaaaagag
aagaaaagaggtggaggtggagggcggcgttccaagaaaggaggcgagtttgatgagttt
gtcaacgatgacactgatgacgacctccctatatccaagaagaagaagaaaaggaagggc
agtggcagtgaacaggaaggcgaagaggaggaaggtggagagaggaagaagaagaggagg
agaagacctccaaagggagaagaaggatctgatgatgatgaaacagaaaatggccccaaa
ccaaagaagcgccgtccaccgagagcagagaaaaagaaggctcccaagccagaacgcctg
cctccttcaatgaaaggaaaaataaaatccaaagccattatatcatcaagcgatgattct
tcagatgaggataaactgaaaattgctgatgaaggacatcccaggaacagcaacagcgac
tctgatgatgacgagaggcccaacagacgcgcctcatcggagagcgactcagatgacaac
cagaacaagtctggcagcgaggcgggtagcccccggaggtctggtaggcaggagtccgat
gaggattccgacagtgaccagccgtccagaaagagaaggcgctccggctctgagcagtcg
gacaatgagtctgcgcagtccgggaggagcccctccggaggctcagagaatgagaacgat
tctcgcccggtttctccaagtgcagagtcggaccacgaatcagagcagggctctgacaac
gaaggttctggccaaggctctggaaatgaatcggaaccagagggctcaaacaatgaggcc
tcagaccgaggctcagaacatggatcagatgatagcgactag
DBGET
integrated database retrieval system
