Rattus norvegicus (rat): 293444
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Entry
293444 CDS
T01003
Symbol
Abca16
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
293444 (Abca16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
293444 (Abca16)
Transporters [BR:
rno02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
293444 (Abca16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_30
RsgA_GTPase
AAA_15
Arf
SRP54
DUF2110
AAA_6
Motif
Other DBs
NCBI-GeneID:
293444
NCBI-ProteinID:
XP_038957107
RGD:
1563534
Ensembl:
ENSRNOG00000015783
UniProt:
D3ZQI3
LinkDB
All DBs
Position
1:184226374..184406021
Genome browser
AA seq
1680 aa
AA seq
DB search
MNQLLLNQLTVLLWKNFTLKKRQVLSTVMEVLAALLFVIMLLIFRALTDMNIAGPYHFTP
QPIATMPSFIKDAQEWELIYIPSEIDVVTEIIEDVKRNLNITIKVRGFPSEVEFEEYILF
DYTSQKVLAAIVFDCDFKNKTDPLPLQVKYHLRFVGAQRTIWWPDKIGWKTRLLFPNHPS
LKPRNPNYLDGGSPGYIKEGFLAVQHAVDKSIMLYHESRAGKELFENIDTLVQRFPYPSH
PQDKLLWISSPFIPLMFILMFSSIVLSIMRSIVFEKEKRLKEYQLIMGLRNWIIWMGYFF
TFFPLYVAIIFLICILLFIQIVEEPILRYSDCSFIFVFLTCYAIASICFAFMVSTFFSKT
RLAASAGNLLFFASFFPYNFISEYYGMLDLTTKITACLSANVALALGINILIKLEIQEIG
VKWDNLWTPANLEDNLNFGYMLGMLLLDAFLYSLVTWYVEAVFPGQCGVPQPWYFFIMRS
YWFGKPKIRKIGEEAKSIPVVHNCYEAEPSNLEAGIQIKHLHKEFKTKPAINNLSLNIYE
GQVTVLLGHNGAGKTTTLSVLTGRFAATRGEAYINGYNISDNMAEIRKDLGFCPQHDLLF
DDLTLSEHLFFYCMIKGHPQNINCVEINRMLSVFNLQENYHTLSGSVSGGVRRKLSIILA
LMGGSKVVILDEPSSGMDPMSRRATWDILQHYKQNRTILLTTHYMDEADVLGDRIAIMVR
GTLHCCGSSVFLKQIYGAGYHIVLEKEPYCDVDNIIAMIQQHVPGSMLENDIGNELSFIL
PKKYVSRFETLFTELEMRQKALGIANFGASITTMEEVFLKVNKLAAPQRSIQTIQPYYLT
YKKMRQDEQQNVNILRNYNKPIFPYLREIATVKFNTGVPLYRQQFYSMFIKRALFIGRNW
KLMFLQIIVVLVVTTYLLLSLHLDDNDIPERELNLSHYGKTIVPYSISGNSDLALNLIKN
LKIFLKSKNQSLKKIKGDMNNYILENKDCRTFCIIALSIKVERNKTVLTIFFNNEAYHSP
AISLSILDNILFMTLSGRDASITAFNKPQPLPHYGSNTVPVNGLQIVQCLAFGISVVVGS
FSIQTVTERISQAKHIQFLTGVCVLTYWLSALLCDLIFFFFACCVLLGIFRFCQLEAFVV
HYNFLDTILIFMLYGWCVVPLTYLGSFLFNSSTAAYIKITLFNYFSTMFSIIIYTIVQFY
GEDFPALIHILIKTILMALPSYNLAMSISKYFDDYEVKRLCAREFRSIYMDCSEPFIQNN
VYGFGEHGIGKFLITLATMGLVFLLLLLSLESVSSSLKNFVFRNVLFYFYNKIRKGRHGV
HSKSTKEDEDEDIRKEKRKVFTLLLRLQNTPLVLNEVTKIYFKCPVVKAVKNISLVVRKS
ECFGLLGLNGAGKTTTFKMLTGEETITSGIAFIDGNSVTKNPRKIRSRIGYCPQSESVLN
HMTGRESLIMYARLWGVPEQDINEYVEAFLHSVHLEPIADQIIYTYSAGSKRRLSTAIAL
MGKSSVVFLDEPSTGMDPVAQHLLWDTVTWVCKTGKAIIITSHRMEECEALCSRLAIMVK
GKFTCLGTPQHVRKRFGQVYTLTVKINIAKDEEKVKEFKDFIKSTFPGNIKFQEFHGTIG
YYIPSTEICWGKVFEILEEAKVLFKLEDYSVKQVTLEQIFLTFANTDKMKTYREIKLQEA
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttgttactcaatcaattaacagttctcctctggaaaaattttacattaaag
aagaggcaggtccttagtacagtaatggaagtcttggcagcattgttgtttgtaataatg
ttgttgatattccgtgcacttactgatatgaatattgctggaccgtatcatttcactcct
caacccattgctaccatgccttctttcatcaaagatgcccaggaatgggaattgatttac
ataccttctgaaattgatgtggtaacagaaatcattgaggatgtaaagaggaatctcaac
atcactataaaagttcgagggtttccttcagaagttgagtttgaggagtacattctgttc
gattatacgtctcagaaagtactggctgccattgtttttgactgtgatttcaaaaacaaa
actgatcctctgccacttcaggtaaaatatcacttgcgttttgttggtgcacagaggacc
atatggtggccagacaagataggctggaaaacgagacttctctttccaaatcatccttct
ctaaaacccaggaatccaaattatcttgacggaggaagtcctgggtacatcaaggaggga
ttcctggcagtgcagcatgccgtggacaagagcatcatgctgtatcatgaaagccgtgct
gggaaagagctctttgaaaacattgacactctggtacagaggtttccatacccaagtcat
ccccaggacaaactactttggatctccagtcccttcatcccactaatgttcatactcatg
ttctcttccatcgttctttccatcatgcgatccattgtgtttgaaaaggagaaaaggtta
aaggagtaccagctcataatggggcttagaaattggatcatctggatgggctatttcttc
acgttcttccctttatatgtcgccattatctttttgatatgtatattactctttatccag
atcgtggaggagccaatcttgcgctacagcgactgcagcttcatcttcgtcttccttaca
tgctatgccattgcatccatatgctttgcctttatggttagcacgttcttcagtaaaact
cgtttggctgcttctgctggaaacctcctattttttgccagtttctttccctataacttc
atctctgaatactatggaatgttggaccttactaccaagataactgcgtgtctgagtgca
aatgttgctttggcactggggattaatatcttaatcaagttggaaatacaagagattggt
gttaaatgggacaacctttggacaccagccaatcttgaggataatctcaactttggctat
atgcttggaatgcttttgcttgatgctttcttatacagccttgttacctggtatgtagaa
gctgtctttcctggacagtgtggtgtgcctcaaccatggtactttttcattatgcgctca
tattggtttggcaaaccaaaaatcagaaagattggagaagaagcaaagtctatccctgta
gtacataactgttatgaagctgaaccttccaacctggaggcaggaatccagatcaagcat
ttgcacaaggaatttaaaactaaacctgcaataaacaacttgtcactgaacatctatgag
gggcaagtcactgttcttctgggacacaatggggcaggaaagaccacaaccttgtctgtt
ctcacaggtcgttttgctgctaccagaggagaggcctatattaatgggtataatatttca
gataacatggctgaaattagaaaagacttgggcttctgccctcaacacgacctattgttt
gatgatttgacactatcagaacatctttttttctactgtatgataaaaggacaccctcaa
aacataaattgtgtggaaattaaccgtatgctgtctgtttttaacctgcaagaaaactac
catacattatcaggctcagtgagtggaggagtgaggcgcaaactctccatcattttagca
cttatggggggctccaaggtagtgatacttgacgaaccatcatctggcatggacccaatg
tcaaggagggccacctgggatatccttcagcattataaacagaatcggaccatcttactg
accacccactacatggatgaagctgacgtcctgggtgaccgcattgccatcatggtcagg
gggaccttgcactgctgtggctcttcagtattcctgaaacaaatatatggtgctggatat
cacatagtcctggagaaggaaccatactgtgatgttgataatattattgcaatgattcag
caacatgttccaggttctatgttggaaaatgacataggaaatgaattatcatttatccta
cccaaaaagtatgtatcaagatttgaaactttgtttacagagttggaaatgagacaaaaa
gcactaggcattgccaactttggagcttcaatcactacaatggaagaggttttccttaag
gtcaataagctggcagctcctcaaaggagtattcagactatccaaccctattacttgaca
tacaaaaagatgagacaagatgagcagcagaatgtgaatattctcagaaattataacaaa
ccaatttttccctatttgagggaaattgctactgttaaatttaacactggggttccactt
taccgccagcaattttattccatgtttataaaaagagcactattcattggccgcaactgg
aagttgatgtttctacagataatagtagttttggttgtcactacatatctcttattatct
ctgcatttagatgataatgatatacctgaaagggaactgaatttgagtcactatggtaaa
accattgtgccttactcaatttcaggaaattctgatttagctctgaatctcataaaaaac
ctgaagatttttctaaagtcaaagaatcaaagcttaaaaaaaataaaaggtgatatgaac
aattacatattagaaaataaagattgccgaaccttctgcattattgcactttctattaaa
gttgagagaaacaaaacagtgctcaccattttcttcaataatgaggcataccactcacct
gcaatatccctgtcaatattagacaacattctttttatgacactttctggccgtgatgct
tccattactgcctttaataagcctcagcctctccctcattatggttcaaacacagtgcct
gtaaatggattacaaatagtacagtgtttagctttcggcatttctgtggtggtcgggtcc
tttagtatccagacagtgactgaaagaatcagtcaagccaagcacatccagtttctgact
ggggtctgtgtgcttacttactggctctctgccttgttgtgtgacctcatcttcttcttc
tttgcctgctgtgtactgctgggcatattcagattctgccagctggaggcatttgttgtg
cattacaacttcctggacacaattctgatttttatgctgtatggctggtgtgttgttcct
ctcacttatcttggaagctttctgttcaacagtagcactgctgcctacatcaaaatcacg
ctctttaactacttttcaactatgttcagtatcatcatttacactattgtgcaattttat
ggtgaagactttcctgcccttatccacatcctcataaagacaattttaatggcactgcct
agttacaatcttgcaatgagtatcagcaagtattttgatgactatgaggtaaaacgactg
tgtgctagggaattcagaagcatttacatggattgcagtgagccattcattcagaacaac
gtgtatggctttggagagcatgggattggaaaatttctgatcacactggctaccatgggc
ttggtttttctcctcttgctcttatccctggagtctgtttccagtagcctgaagaacttt
gtctttcgaaacgttctcttttatttctacaataagatcagaaaaggcaggcatggtgta
cactctaagagtaccaaagaagatgaggatgaagacataagaaaagaaaaaagaaaagtc
tttacactgctgctcaggttacagaacaccccattggtccttaatgaagttacaaagatt
tattttaagtgtcctgttgtcaaggctgtgaaaaatatctcccttgtagtcaggaagtca
gagtgctttggactgcttggactaaacggagctggaaaaactactacattcaaaatgctg
accggagaagagactatcacctctggaattgcgtttattgatggcaatagtgtcactaaa
aatccaagaaagattaggtcaagaattggttactgtcctcagtctgaatctgtgctgaac
cacatgacaggccgggaatcgttgatcatgtatgctaggttgtggggggtcccagagcaa
gacatcaatgagtatgtggaagcctttctgcattcagtgcacctggaacccattgctgac
cagattatctacacatacagtgccggaagcaaacgtaggctaagcactgccatcgcccta
atgggaaagtcttcagttgtcttcctggatgaaccatctactggcatggacccagtagct
cagcatctgctctgggacacagttacatgggtttgtaagactggtaaagctatcatcata
acttcccacagaatggaagaatgtgaggccctctgttctagactggccatcatggttaaa
gggaaatttacatgcctaggcaccccccagcatgtcagaaagaggtttggtcaagtatac
actctaacagtaaagatcaatattgctaaggatgaagaaaaagtaaaagagttcaaagat
ttcattaaatcaacttttccaggtaacatcaaattccaggaatttcatgggactattggc
tactatattccaagcacagaaatctgctggggaaaggtatttgagattttggaggaagct
aaagtgctgttcaaattagaagactattctgtcaaacaagtaaccctggaacaaatcttt
ctgacctttgctaatactgataaaatgaaaacttatcgggaaataaagctacaggaagct
tga
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integrated database retrieval system
