Rattus norvegicus (rat): 293650
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Entry
293650 CDS
T01003
Symbol
Tcirg1
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a 3
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00190
Oxidative phosphorylation
rno01100
Metabolic pathways
rno04142
Lysosome
rno04145
Phagosome
rno04721
Synaptic vesicle cycle
rno04966
Collecting duct acid secretion
rno05152
Tuberculosis
rno05165
Human papillomavirus infection
rno05323
Rheumatoid arthritis
Module
rno_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
293650 (Tcirg1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
293650 (Tcirg1)
04142 Lysosome
293650 (Tcirg1)
09150 Organismal Systems
09155 Excretory system
04966 Collecting duct acid secretion
293650 (Tcirg1)
09156 Nervous system
04721 Synaptic vesicle cycle
293650 (Tcirg1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
293650 (Tcirg1)
09171 Infectious disease: bacterial
05152 Tuberculosis
293650 (Tcirg1)
09163 Immune disease
05323 Rheumatoid arthritis
293650 (Tcirg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
293650 (Tcirg1)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
293650 (Tcirg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
DUF5700
DUF2730
Motif
Other DBs
NCBI-GeneID:
293650
NCBI-ProteinID:
NP_954520
RGD:
735136
Ensembl:
ENSRNOG00000017220
UniProt:
Q2I6B0
LinkDB
All DBs
Position
1:complement(210556270..210568021)
Genome browser
AA seq
834 aa
AA seq
DB search
MGSMFRSEEVALVQLLLPTASAYNCVSQLGELGLVEFRDLNESVSAFQRRFVVEVRRCEE
LEKTFTFLREEVQRAGLTLTPPEGTLPAPPPRDLLRIQEETDRLAQELRDVRGNQQALRA
QLHQLQLHSAVLGQSHAPPMAAVHTEGPTTERTPLLSATPGPHADLKVNFVAGAVEPCKA
AALERLLWRACRGFLIASFKETEGQLEDPVTGEPATWMTFVISYWGEQIGQKVRKITDCF
HCHVFPYLEQEEARLRTLQQLQQQSQELQEVLGETERFLSQVLGRVQQLLPPGQVQIRKM
KAVYLTLNQCSVNTTHKCLIAEVWCATRDLPTVQQALQSGSSEEGVSAVAHRIPCQDMPP
TLIRTNRFTSSFQGIVDAYGVGRYREVNPAPYTIITFPFLFAVMFGDVGHGLLMFLFALA
MVLTENQPAVKTTQNEIWQTFFGGRYLLLLMGLFSIYTGFIYNECFSRATTIFPSGWSVA
AMANQSGWSDEYLSQHPMLTLNPNITGVFLGPYPFGIDPIWSLATNHLSFLNSFKMKMSV
ILGVTHMAFGVFLSIFNHVHFGQAHRLLLETVPELIFLLGLFGYLVFLIVYKWLYVSAAS
ASSAPSILIHFINMFLFSQNPTNRLLFHGQVVVQYALVVLALATVPILLLGTPLYLLRQH
HRRNTQRRPTAGRQDEDSDKLLASPDASTLENSWSPDEEKAGSSGDEEAEFVPSEIFMHQ
AIHTIEFCLGCISNTASYLRLWALSLAHAQLSEVLWAMVMRIGLGMGREIGVASVVLVPV
FAAFAVLTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFAFTVDSD
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatgttccggagtgaagaggtggccttggtccagctcctgttgcccacagca
tctgcctacaactgtgtgagccagctgggtgagctgggcctcgtggagtttagagacctc
aacgaatcggtgagtgccttccagagacgcttcgtggtagaggtccggcgctgcgaggag
ctggagaagaccttcaccttcttgcgggaagaagtgcagcgggcaggcctgacactgacc
ccacccgaggggacactgccagcaccacctccccgagacctgctgcgcatccaggaggaa
acggaccgcttggcccaggagcttcgggatgttcgaggcaaccaacaggcacttcgggcc
cagctgcaccagctacagctccactcagccgtgctgggccagagccacgcccctccgatg
gcagctgtccatacggagggacccaccactgagagaacacccctgctttcagccacccca
gggccacatgcagacctgaaggtcaattttgtggcaggtgctgtggagccttgcaaggct
gcagccctggagcgcctgctttggagagcttgccgcggcttcctcattgccagctttaag
gagactgaggggcagctggaggacccggtgacgggtgagcctgcaacttggatgaccttt
gtcatctcctactggggtgagcagatcggacagaaggttcggaagatcacagactgcttt
cactgtcatgtcttcccgtacctggagcaggaggaagcccggctcaggaccttgcagcag
ctgcagcagcagagccaggagcttcaggaggtcctgggggagacagaacggttcctgagc
caggtgttgggccgggtgcagcagctgctgcccccagggcaggtgcagatccggaagatg
aaggccgtgtacctgaccctcaaccagtgcagtgtgaacaccacacacaagtgcctcatt
gcggaggtctggtgtgccacgagggaccttcccactgtacagcaggcgctgcagagcggc
tcgagtgaggaaggagtgagtgctgtggctcaccgtatcccttgccaggacatgcctcca
actctcatcaggaccaaccgcttcacctccagcttccagggcattgtggatgcctatggt
gtgggccgatacagggaagtcaaccctgctccctacaccatcatcacattccccttcctc
tttgctgtgatgtttggcgatgtgggccacggactgctcatgtttctcttcgccctggct
atggtcctcactgagaaccaaccagctgtaaagaccacgcaaaatgagatctggcagacc
ttctttgggggtcgctacctactcctgctcatgggtctgttctccatctacacgggcttc
atctacaacgagtgcttcagccgagccaccactattttcccctcaggctggagtgtggct
gccatggccaaccagtcaggctggagtgacgagtatctgtcccagcaccccatgcttacc
ctgaaccctaacatcactggtgtcttcctcggaccttatcccttcggcattgacccgatc
tggagcctggccaccaaccacctgagcttcctcaactccttcaagatgaagatgtctgtc
atccttggggtcacacacatggcctttggggtgttcctcagcatcttcaaccatgtgcac
tttggccaggcccaccggctactgctggagaccgtgcctgagctcatcttcctgttgggc
ctctttggctaccttgttttcctcattgtctacaagtggctctacgtctcagctgccagc
gcctcctcggcccccagtatcctcattcacttcatcaatatgttcctcttctcccaaaac
cccaccaatcggctgctcttccacgggcaggtagtggtacagtatgcgctggtggtcctg
gctttggccacagttcctatcctgctgctgggcacacccttgtaccttctgcgccagcac
caccgaagaaacactcagagaaggcctacagcaggcagacaggatgaggacagtgacaag
cttctggcctccccggatgcttccaccttggagaacagctggagccctgatgaggagaag
gctgggagctcaggagatgaagaagctgagtttgtcccttcggagatcttcatgcaccaa
gccatccacaccattgagttctgcctgggctgcatctccaacacagcctcctacttgcgt
ctctgggccctgagcctggctcatgctcagctgtctgaggtcctgtgggccatggtgatg
cgcataggcctaggcatgggccgagagattggtgtggcatctgtggtgctggtccctgtg
tttgctgcctttgctgtgttgactgtggccatcttgctagtgatggaggggctctcagcc
ttcctacatgccctgcggttgcactgggtggagttccagaacaagttctattcagggacc
ggctacaagctcagccccttcgccttcactgtggacagtgactag
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